Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A1085 |
Symbol | |
ID | 4783688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 1158651 |
End bp | 1159820 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640089647 |
Product | putative transport system ATP-binding protein |
Protein accession | YP_001020281 |
Protein GI | 124266277 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.224743 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.500866 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCTCAAGG CGCGGCAGCG GGGCGAATAC GGGAATGCGA ACGAAATTCA TTTGAAGTCA GCTCGCTATC ATAGAGGGAT GCTGCTGCGT CTCGCCGATG TCTCGATCCG CTACCCGGCG GCGCACCCGG GCGGCGGCGA ACGGCCGGCG GTCGACGGCG TGTCCTTCGG TCTGGCCGAG GGCGAGATCG GTGTGCTGAT CGGCCCGTCG GGCTGCGGCA AGACTTCGCT GCTGCGTGCC GTCGCCGGCC TGGAGCCGCT GGCCGGCGGC AGCATCTCGC TGGGCGACGA ACGGCTCGGC GACGCGGCCA CCGGCCGCCA CCTCGCACCG GAGCAGCGCC GCATCGGCAT GGTGTTTCAG GACTATGCGC TGTTCCCCCA TCTCAGCGTG GCGCAGAACG TGGCCTTCGG CCTGCACGAC CTGCCGCGGG CGCAGCGCGA GCAACGCGTG GCCGAATTGC TCGACCTGGT GGGCCTGGGC AGTGCCGCGA AGCGCGCGCC GCACCAGCTG TCGGGCGGGC AGCAGCAGCG CATCGCCCTG GCCCGGGCCC TGGCGCCGGC GCCGCGGCTG CTGCTGCTGG ACGAACCCTT CTCCAGCCTC GACGTCGATC TGCGCGAACG CCTGGCGCAG GAGCTGCGCG CGATTCTCAA GCGGACCGGC ACGACGGCGC TCTTCGTCAC CCACGATCAG CTCGAGGCCT TCGCGCTGGG TGACGTGATC GGCGTGATGC ACCGGGGCCG CCTCGACCAG TGGGACAGCG CCTACCAGCT CTACCACCGT CCGGCGACAC GCTTCGTGGC CGACTTCATC GGGCACGGCG TGTTCGCGCC GGCCCGCATC GTGGACGGCG CCGACGGTCC GCGTGTGCAC ACCCCCGTGG GCGACCTGAG CGATCTCGAG GAATGCCCGT TGTCCGCCGC CTACCCGGGT GGCGAGTGCG AGGTGCTGCT GCGGGCGGAC GACATCGTCC ACGACGACAG CTCGCCGGTG AAGGCCCGCA TCGAACGCAA GGCCTTCCGC GGCTCCGAGT TCCTGTACAC GCTGCAGCTC GCCAGCGGCG AACGCGTGCT CGCCCACGTG CCCTCGCACC ACGATCACCA GCTCGGCGAA TGGATCGGCA TCCGCGCCGA GGTCGACCAC GTGGTCACCT TCCCACGCCA GCCGAGCTGA
|
Protein sequence | MLKARQRGEY GNANEIHLKS ARYHRGMLLR LADVSIRYPA AHPGGGERPA VDGVSFGLAE GEIGVLIGPS GCGKTSLLRA VAGLEPLAGG SISLGDERLG DAATGRHLAP EQRRIGMVFQ DYALFPHLSV AQNVAFGLHD LPRAQREQRV AELLDLVGLG SAAKRAPHQL SGGQQQRIAL ARALAPAPRL LLLDEPFSSL DVDLRERLAQ ELRAILKRTG TTALFVTHDQ LEAFALGDVI GVMHRGRLDQ WDSAYQLYHR PATRFVADFI GHGVFAPARI VDGADGPRVH TPVGDLSDLE ECPLSAAYPG GECEVLLRAD DIVHDDSSPV KARIERKAFR GSEFLYTLQL ASGERVLAHV PSHHDHQLGE WIGIRAEVDH VVTFPRQPS
|
| |