| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0962 |
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| Symbol | |
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| ID | 4787108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 1020469 |
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| End bp | 1022340 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640089524 |
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| Product | putative phenol-degradative gene regulator transcription regulator protein |
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| Protein accession | YP_001020159 |
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| Protein GI | 124266155 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAATC CTCTCCATTC GCATGCGCAC GGGATCACGT CGATGAACGC TTCACCTGCA
CCGAACGCCG CCGACTTTCT CCACGCGCAT TACCTGGCCA GTCGCAGCGA CCCGTCGGCC
ACGGAGCTCC GGCCCACGCA CCGCGAGTTG GCGGAGTGGC TGACCTTCGA CCCGGACACC
GGGCGCATCT GGCTCGACGA CGAGCGCATG GTGATGCTGA ACCACCAGAC GCTCGGCTCG
CTGCGCAGCG AACTGATCCA GGGCGTCGGT GTGGAGCGGG CGCGCGGCAT CCTCACCCGC
AGCGGCTACA TCGCCGGCAT GCGCGACGCG CGCTTCGTGG CCTCGCACTG GCCCAAGGAA
GACCCGGTCG GCAAGCTGCT GGCCGGCACG CGCCTGTTCG GCCTGCAGGG CCTCGCCCGT
GTCGAGGCGG TGCACTTCGA CTACGACCCC GAGCGCATCG CCTTCAGCGG CGAGTTCTTC
TGGCATCACT CGCTGGAGGA CGACGAACAC ATCAACGCCT TCGGCGTCGG CACCGACGCG
GGCTGCTGGC TGCCGATCGG CTACGCCAAC GGCTACGTCT CCACGCTGCT TGGCACGTCG
ATCATCTTCC GCGAGCTCGA GTGCCGCTCG ACCGGTGCCT CGGTCTGCCG CGTGATCGGC
AAGGCCGCCC GCGACTGGGA CAACGTGGAG GAAGACCTGC GCTACATGCA GGCCGAGGGC
TTCGTCGGCG AGCGCCCGGG TCCGGAACCG ACGCCGCGCG ACGGTCCGCG CCTCGGCGTG
CACGACGCCG CGGCGGATGC GGCGCCGCGC ATGGTGGGCG TCTCGTCGAG CTTCAATGCC
GCCTGCCACT CGCTGCGCAA GGTGGCCACC ACCACCGCGA CGGTCCTGTT CTTCGGCGAG
TCCGGGGTCG GCAAGGAGCT GTTCGCCAAG ATGCTGCACG AGATCAGCGA GCGACGCGAC
GGGCCCTTCG TGTCGGTCAA CTGCGCGGCG ATCCCGGAGA ACCTTGTCGA GGCCGAGCTG
TTCGGCGTCG AGCGCGGCGC CTACACCGGC GCCCACGCGT CACGGCCGGG CCGCTTCGAG
CGCTCGCACC GGGGCACGCT GTTCCTCGAC GAGATCTCGT CGCTGAGCCT GGTCGCGCAG
AGCAAGCTGC TGCGCGCGCT GCAGGAGAGC GAGGTCGAGC GGGTCGGTGG CACCCGCCCG
ATCCGGCTCG ACCTGCGCGT GGTGGCCGCG TGCAACGTCG ACCTGCGCGA GGAAGTCCGG
CAGGGGCGCT TCCGCGAAGA CCTGTTCTTC AGGCTCAACG TCTACCCGAT CCACCTGCCG
CCGCTGCGGG CCCGCAGCGA GGACGTGCCT CTGCTGATGA CGCACTTCCT CAAGCTCTAC
GGTGCCCGCT ACGGCCGGCA GATCCACGGC TTCACGCAGC GCGCGATGCG CGCGATGCTG
ACCTACACCT TCCCCGGCAA CGTGCGCGAA CTGCAGAACA TGATCGAGCG GGCCGTGATT
GCCGCCAGCG ACGAGCCGCA GATCGATACC GTGCACCTGT TCCGCGACGA GCTGTTCAAC
GCGAAGTCGA CCTTCGCCGT CGGCGATCAA GGCCGATTGG CCGACACCGA GGGGTCGGCG
CCCTCCGCGC CGCATCCGGA GCCCTCGGGC GACGAGACGC TGCTCGACCG GGTGCTCCGC
CTGCGCAGCG CGGTGCGGAG CCCTCAGGCG TCCGACACCT GGCTCGAAGA ACTGGAGACC
CAGCTCGTCG AGGAAGCGGT GCAACGCTGC AACGGCAACA TGGCCGCCGC GGCACGGCTG
ATCGGCATGG CGCGGACGCA GGTGGTCTAT CGCATGCGCA GGAAGAACGT GACGACTCAG
GCGAGGGCCT GA
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| Protein sequence | MSNPLHSHAH GITSMNASPA PNAADFLHAH YLASRSDPSA TELRPTHREL AEWLTFDPDT
GRIWLDDERM VMLNHQTLGS LRSELIQGVG VERARGILTR SGYIAGMRDA RFVASHWPKE
DPVGKLLAGT RLFGLQGLAR VEAVHFDYDP ERIAFSGEFF WHHSLEDDEH INAFGVGTDA
GCWLPIGYAN GYVSTLLGTS IIFRELECRS TGASVCRVIG KAARDWDNVE EDLRYMQAEG
FVGERPGPEP TPRDGPRLGV HDAAADAAPR MVGVSSSFNA ACHSLRKVAT TTATVLFFGE
SGVGKELFAK MLHEISERRD GPFVSVNCAA IPENLVEAEL FGVERGAYTG AHASRPGRFE
RSHRGTLFLD EISSLSLVAQ SKLLRALQES EVERVGGTRP IRLDLRVVAA CNVDLREEVR
QGRFREDLFF RLNVYPIHLP PLRARSEDVP LLMTHFLKLY GARYGRQIHG FTQRAMRAML
TYTFPGNVRE LQNMIERAVI AASDEPQIDT VHLFRDELFN AKSTFAVGDQ GRLADTEGSA
PSAPHPEPSG DETLLDRVLR LRSAVRSPQA SDTWLEELET QLVEEAVQRC NGNMAAAARL
IGMARTQVVY RMRRKNVTTQ ARA
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