| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0475 |
|---|
| Symbol | |
|---|
| ID | 4784194 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 515218 |
|---|
| End bp | 515832 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640089033 |
|---|
| Product | pentapeptide repeat-containing protein |
|---|
| Protein accession | YP_001019672 |
|---|
| Protein GI | 124265668 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1357] Uncharacterized low-complexity proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.019443 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCCT CATCCCTGCG ATCGCTGCAC GCAGTCGCCG TGCTGGTGAC GCTGACGGCG
GCCCTCGCCG GCGTTCGACC CGTCCAGGCG ACGGAAGACG ACGGCAACGC CGCCGCGCCC
GACTACCTCA ACGGCTGCGG CATCTGGCCG CACACGCGCT GCCCCGGCGT CGACCTGCGC
GGCGCCGATC TGTCGGCCCG CAATTTGGCC GGTGCCGACC TGCGTGGCGC CAATCTGGCC
GGCGCGGACC TGCGCGTCGC CAACCTGGCC GGTGCCAATC TCGACGGCGC GAATCTGGCC
GGGGCGAAGC TCGGCAAGAT CAATGCGCCC ACCGCCACCT TCCGCGGCGC GAATCTGGCC
GGCGCCGACC TGGAGTTCGC GCGCGTGATG CGCTGCGACT TCAGCGATGC CGACTTCACC
GGCGCGAATC TGGAGATGGT CCGCGCCGCC TTCTCCTGGT TCGTGCGCGC GAAGATCGTC
GATGCCAACC TGCAGGAGGG CAAGTTCAGC ACCGTGAACT TCACCGGCGC GACGATGAAG
GGCAACGTGC TGCGCTTCGC CATCTTCCCG GACTCGACCT TCGATCAATG CACCGGTTGC
CCCACGGACT GGTAG
|
|---|
| Protein sequence | MTSSSLRSLH AVAVLVTLTA ALAGVRPVQA TEDDGNAAAP DYLNGCGIWP HTRCPGVDLR
GADLSARNLA GADLRGANLA GADLRVANLA GANLDGANLA GAKLGKINAP TATFRGANLA
GADLEFARVM RCDFSDADFT GANLEMVRAA FSWFVRAKIV DANLQEGKFS TVNFTGATMK
GNVLRFAIFP DSTFDQCTGC PTDW
|
|---|
| |