| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1833 |
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| Symbol | |
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| ID | 7270379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 1945776 |
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| End bp | 1947563 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643570448 |
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| Product | periplasmic copper-binding |
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| Protein accession | YP_002466862 |
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| Protein GI | 219852430 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3420] Nitrous oxidase accessory protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.107364 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCACA GCCATTTTTT CAAGGCACTG TTGATCATGC TGGTGCTCGT CACCCTTGTG
CCGTCGGCAC TCGCTGCAGG ATCGATCAGT GTCAATGGTC CGACTGTCAT TTCATCGCCT
GGAACGTATG TCCTTACCAA GGACATTTCA GGTGGTGGGT CACCCGCCAT CTGGATCCAG
TCTTCTGATG TGATCTTTGA TGGTAATGGT CACACAATCG ATGGGACCGG AACCTCAGGA
TCGTTTGGCA TACTTGTGAA CGGTGGGTCG GGACTCTCTC GTGTCACAGT CAAAAATGTG
AAGTTAACCA ACTGGCACTA TGGCCTCTAT TTTAAGGGTG TCAGCAATGG ACAGATCAGC
GGGGTCACTG CATCAAATAA TAATAATGCC GGGATATGTC TGGCATACTC GAGCAACAAT
CAGGTAACTG GTTGTACCTC CACTGGCAAC GAACAGGGTA TTCTGATCTC GTTCGCCAGC
AGTTACAATA CGGTGAGCGG CAACACCGCA AGCAACAATT CCGACTCCGG TGTCTATGTG
GCGTCCACGT CGTCGACGGT CTACGATACC ACTGGTAACC AGATCAATGG AAACACCCTG
AATGGAAATT ATCAGGGTGT CTATGTTGTC TTCTCGAATG GGAACACTTT CACTGACAAT
TCGATGAGCG ATAATTCTGA TTATGGAATC TTCGCCGACT ATGCAAGCGG CACCTCGATG
ATCAGGAACA GCATTTCGGG TTGTGGACAG AGTGGTGTGG TGCTCTATGA TGCACGGGGT
TGTATCATCT CCGGCAACAC CGCGACCGGC AACACCGATT ATGGTATCTG GCTCTCCTGC
TCCTCAGGAA ACACGATGAG TGGAAATACC CTGGTCAACA ACAAGGGCGG GATAGCGCTC
CTTGGGGATG ATACGCTCAC CTCCGATCAG AATATCGTCA ACGGGAACAA GATCACTGAC
AACAGTGAAT CAGGTCTCTT CCTCTGCCGG TCTTCAGGGA ATACGATCAC CAACAATTAC
CTCTCCAACA CCCGGGATGT CATGATCGGT GGAACCGACC TCGCCAGTGT CTGGAGTGTC
CAGACCAAGG CCGGCTCCTC GATCACCGGC GGGTCCACAC TTGGTGGGAA CTTCTGGGGT
ACTCCAAGTG GGACCGGATT CTCGCAGACG CATGCCGATG CGAACAACGA CGGTATCTGC
GATCAGTCCT ACCAGTTCAG CGGTGCGAAC GTCGATAAAT ATCCTCTGGT CGCATCAACA
TCAACCGGGT CAGGACCGAC CCCCACCATT CCATTGCCGA ACGCGACCAC GGTGCCGGTG
ACCACGGTCA CCCCCGATCC ACAGGTGACG GTTCCTGTGG TAGTGGTGAC TTCACTGCCG
GTCGTTGTCA TGCCGCCAGA GCCGACACCC AATACATCAA CGACGGTGCA GACACCTGTG
GCCAACACGA CTCCATCGAT TCCGGTTACG ATTCCTGTGC CGACAGGGAC GATCGTCACT
CCTGTGACGA ACACGACCCC AATCGCGACG CCCACGGTCA CCATCACCGA TAAGCAGTCT
GATCCGATCA AGCCGATCGG AACCCTGACC ACCCCGCCGA GGGACCTTGA TGGGGATCAC
CGGTATGAGG ATGTGAATGG CGATGGGAAG TTCAACTTTG ACGATGTTGT GACCCTCTAT
AACGATCTCG ATTCAATCAC CGATCCCGCA CAGATTATAG CATTCGACTT CAATGCGAAT
GCCAGAATCG ATTTCGGTGA TGTGGTGAAA CTGAACTCGA TGTTATAA
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| Protein sequence | MKHSHFFKAL LIMLVLVTLV PSALAAGSIS VNGPTVISSP GTYVLTKDIS GGGSPAIWIQ
SSDVIFDGNG HTIDGTGTSG SFGILVNGGS GLSRVTVKNV KLTNWHYGLY FKGVSNGQIS
GVTASNNNNA GICLAYSSNN QVTGCTSTGN EQGILISFAS SYNTVSGNTA SNNSDSGVYV
ASTSSTVYDT TGNQINGNTL NGNYQGVYVV FSNGNTFTDN SMSDNSDYGI FADYASGTSM
IRNSISGCGQ SGVVLYDARG CIISGNTATG NTDYGIWLSC SSGNTMSGNT LVNNKGGIAL
LGDDTLTSDQ NIVNGNKITD NSESGLFLCR SSGNTITNNY LSNTRDVMIG GTDLASVWSV
QTKAGSSITG GSTLGGNFWG TPSGTGFSQT HADANNDGIC DQSYQFSGAN VDKYPLVAST
STGSGPTPTI PLPNATTVPV TTVTPDPQVT VPVVVVTSLP VVVMPPEPTP NTSTTVQTPV
ANTTPSIPVT IPVPTGTIVT PVTNTTPIAT PTVTITDKQS DPIKPIGTLT TPPRDLDGDH
RYEDVNGDGK FNFDDVVTLY NDLDSITDPA QIIAFDFNAN ARIDFGDVVK LNSML
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