Gene Mpal_1806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1806 
Symbol 
ID7270352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1899984 
End bp1900934 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content63% 
IMG OID643570421 
Producthypothetical protein 
Protein accessionYP_002466835 
Protein GI219852403 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1240] Mg-chelatase subunit ChlD 
TIGRFAM ID[TIGR02226] N-terminal double-transmembrane domain 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.539334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGGCT TTACCAATCC CCTCTGGCTC GTGGGTCTGA TCGGAATACC GATTCTCTGC 
TATCTGTACC GTCGTGCGGT CAGAAGCAGG AAGAACACCG CGATGGCCTT CTCGCATGTC
GCCTTTCTGA AGTCTGCCCT CGGCGAGAAG AAGCCGTCCC GGCGTCCCCA GTACCTGTTC
ATCCTCTCGC TGGTGGCGAT CGCGCTCGTG ATCGTCGGGC TGGCGAATCC GCACCTTCCC
CTGGACCAGA CCCGGGACGG GGTCAGCGTC GTCCTCGCCA TTGACGACTC CGGGAGTATG
GCAGCGAACG ATTACCAGCC GACCCGCCTT GAGGCGGCGA AGGAATCGGC CTCGGTGCTG
ATCAAATCCC TCGACCCGAA GGACTATGCC GGTGTCGTGA TCTTCGAGTC CGGAGCGACG
ACGGCGGCGT ATCTCTCCCC GGACAAGGAC CGGGTGATGG AGAAGACGGC GGCGATCGAG
CAGAAGAACG GACAGACGGC GCTCGGTGAC GGGCTGGCCC TGGCCGTCGA CATGGCCGAC
TCGATCCCGA ACCAGAAGAA GGTGGTCGTC CTCCTCTCCG ACGGGGTGGG CAACGCCGGC
GTGATCTCCC CTGAGGATGC CACGGCCTTC GCCGCTCAGA ACAAGGTCCA GGTCTTTACG
GTCGGGCTGG GCTCGAAGAG TCCGGTCCTG CTCGGAACCG ACCCGACGGG CACGCCCCAG
TACGCGACCC TCGATGAAGC GGCCCTGCAG TCGATCGCAG AGAAGACCGG CGGGACCTAT
TACACCTCGG TGGACGAGCA GACCCTGCAC CAGATCTATG CCGGGCTGAA CAAGGAGATC
GTCCGGGAGA AGGAGGAGAC CAGCATTCAG CCGATTCTGT TTGCCGGGGT ACTCCTGGTC
CTCCTCGCTG AGCTCTACCT TCGCTACGGC AAGAGGCGGA TCATTCCATG A
 
Protein sequence
MPGFTNPLWL VGLIGIPILC YLYRRAVRSR KNTAMAFSHV AFLKSALGEK KPSRRPQYLF 
ILSLVAIALV IVGLANPHLP LDQTRDGVSV VLAIDDSGSM AANDYQPTRL EAAKESASVL
IKSLDPKDYA GVVIFESGAT TAAYLSPDKD RVMEKTAAIE QKNGQTALGD GLALAVDMAD
SIPNQKKVVV LLSDGVGNAG VISPEDATAF AAQNKVQVFT VGLGSKSPVL LGTDPTGTPQ
YATLDEAALQ SIAEKTGGTY YTSVDEQTLH QIYAGLNKEI VREKEETSIQ PILFAGVLLV
LLAELYLRYG KRRIIP