| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1706 |
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| Symbol | |
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| ID | 7271269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 1767908 |
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| End bp | 1769725 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643570321 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_002466737 |
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| Protein GI | 219852305 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAGGG GTAAAGAGCA AGGTCAGTCG GAATTTGATG AGATCAGAAC CATCCTCAAT
CTGAACCCCC GGGGTCTCTC TATCCAGGAG ATTGCTGAGA TCATGGGGGC AAACCGGAAT
TCGGTTGCCA AGTATCTGGA GATCCTGCAG ATACAGGGAT CCGTCGATCT CAGGAAGATG
GGGAATTCCA AGATCTACCT GACGGCCTCC CGCTACCCGG TTAGAACGCT CCAGCGTCTC
TGCACTGATG GTCTCCTCAT TCTGAACCAT GAACTGATGA TAGTCTCCTG TAATAACCGG
TTATCTGATT ATCTGGAATC AGTATCTGGT GCTATCACCG GCACCACTCT CAATGACCTG
CTGTATCCGC TCAAGGCATG CGATAAGATC CTGACACTGG CCACTGCAGC GGTGAGAGGA
AAGGAGGGTG CAATCAGTAT CGTCCCGAGA TGGGGACCTC TGACGCATGA ACTGCAGTTA
CACCTGCTTC CCATTGTTTT TTCCAGTGGT CGACCTGGAG CGGCTGTGAT CCTCAAGGGC
CTCTGCGAAG AAAAAGGTGG TATGGGACTG GGGGGAAGTG GTTCGGATTT TGAGAGGATG
CTGCTCGATC AGATGGAGGA GGTCTACTGT CGTCTCTCTC TGGATCTGTC TATCATCGAA
GTGAACCTGG CTTTCTGTCG TATGAGTGGA CACTGCCATG ATGAACTGAT TGGATTTCGG
TTCAGGCTGA TGGTGCCTGA AGAGGACTGG GCCAGAACCT CCGGGAGGTT GTTAACTCTG
ACTCCTCAGA GCCCCATGAT CCTCCTTGAA CATCGCGTTC TCACGGGTGA TGGCCATATT
AGATGGGTGA GATGGACATA CCGGGGGCTA TTCTCCTGGG TTGGTAGTCT TACCGAATAT
TTGTGTACAG GTCTTGATAT CACCGATCAG AAAAACACAG AAGATCGTCT TGAGCATTTA
CATACTCATT TCGAAGAGGT TATCCAGAAA AGAACGGATG AACTTCGTGA GATAAACCGA
CAACTGTTTC AGGAAGTCAG TCATCGGGAG GCAGCGGAGC AGCAACTCCG CCTCACAAAG
TATGGTGTCG ACAATGCAGC AGAGATGATC CTCTGGACGG ATCAGTATGG AATTGTCACG
TTGATCAACA GGCGAGGCAA GGAGGTGCTC GGGTTAGATA TTGGTGAATC CTTGATGACC
TACATCGAAA GAAACTATCC GGAGCGTACT CAGTGGCAGG AACTCTGGGA ATTGCTGGTT
GAAGATGGTC CGTTCAAGAT AGAACGGATG ATCCTGAGAG TGGATAGCAC CTGGTTCCCG
GTTGAGATGA TGATCAATCA CCTCTTGTTT GGAGGGAGGG AATATTCATG CTTCTTTGTC
AGGGATATCA GTGAACGGAA GGGGTATGAA ACTGCTCTCC AGGGGGCAGA GGAGAAGTAC
CATCTCCTGA TTGAAAATGC TCGTGATGTA ATCTTTCGAA TATCCATACA ACCGGAGTTC
AATATCGACT ACCTCAGTCC CTCTATTGAA CTGCTGACCG GTTTTTCTCA GGATCAGTTC
TATGCCAATC CGGTGTTGGT CACCCAGGTC TTGAATGAGC AGAATTACAG GGCTTTCCTC
TCATATTTAG ATGATCCCCG GATTTTTGAG GGTCCAACAA CGGTCAGGTT CCGACGAAAA
GATAAGAGTT GGGGATGGCT TGAGGTCTCT GTTGTATTCA TCAGAGATGA TCAGGGTTGC
ATCACTGCGC TTGAAGGGAT AGGTCGTGAC ATATCGAACA GAAAAAATGG GGAGGATGAA
ATTCGTCTGG GAGCGTAA
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| Protein sequence | MRRGKEQGQS EFDEIRTILN LNPRGLSIQE IAEIMGANRN SVAKYLEILQ IQGSVDLRKM
GNSKIYLTAS RYPVRTLQRL CTDGLLILNH ELMIVSCNNR LSDYLESVSG AITGTTLNDL
LYPLKACDKI LTLATAAVRG KEGAISIVPR WGPLTHELQL HLLPIVFSSG RPGAAVILKG
LCEEKGGMGL GGSGSDFERM LLDQMEEVYC RLSLDLSIIE VNLAFCRMSG HCHDELIGFR
FRLMVPEEDW ARTSGRLLTL TPQSPMILLE HRVLTGDGHI RWVRWTYRGL FSWVGSLTEY
LCTGLDITDQ KNTEDRLEHL HTHFEEVIQK RTDELREINR QLFQEVSHRE AAEQQLRLTK
YGVDNAAEMI LWTDQYGIVT LINRRGKEVL GLDIGESLMT YIERNYPERT QWQELWELLV
EDGPFKIERM ILRVDSTWFP VEMMINHLLF GGREYSCFFV RDISERKGYE TALQGAEEKY
HLLIENARDV IFRISIQPEF NIDYLSPSIE LLTGFSQDQF YANPVLVTQV LNEQNYRAFL
SYLDDPRIFE GPTTVRFRRK DKSWGWLEVS VVFIRDDQGC ITALEGIGRD ISNRKNGEDE
IRLGA
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