| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1290 |
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| Symbol | |
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| ID | 7271150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 1319472 |
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| End bp | 1320980 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643569924 |
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| Product | protein of unknown function DUF39 |
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| Protein accession | YP_002466347 |
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| Protein GI | 219851915 |
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| COG category | [K] Transcription
[S] Function unknown |
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| COG ID | [COG1900] Uncharacterized conserved protein
[COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0616948 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.376218 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAGT CCATTGGCCT GATCAACCAG CGGATCGCTG ACGGCAATGC CACTGTTGTT
ACAGCAGAGG AGATGCCTGC CCTGGTTGAT GAACTCGGTG AAGAAGGGGC CCTTGAAACA
GTGGATGTGG TCACGACCGG AACATTTGGA GCGATGTGCT CGACGGGAGC ATTCCTGAAC
TTCGGTCACG CCGACCCGCC GATCCGAATG GAACGGGTCT GGCTGAACGA TGTCGAGGCG
TATGCCGGCC TCGCTGCGGT GGATGCTTAT ATCGGCGCCA CCCAGCAGTC CACAACGCGT
GGGGACCAGT ACGGCGGCGC CCATGTGCTC GAGGACCTGG TATCCGGGAA GCAGATCGAC
CTCCGGGCCA TCTCCCGCGG TACCGATTGC TATCCCCGGC GGACGATCAA CACCGAGCTG
ATCCTTGAGG ATCTGAACCA GGCCACCATG TGTAACCCCC GGAATGCATA CCAGCGCTAC
AATGCCGCAA CCAACACCAC CGACCGGACC CTCCACACCT ACATGGGGAT GCTCCTCCCG
AACAGTGGAA ACATCACCTA TTCTGGGGCA GGGCTGTTGA ACCCGATCAC CAACGACCCG
AAGTTCCGGG TGATCGGAAG CGGGACGCCG ATCCTGCTCG GTGGCGGTCA GGGGATGATC
GTTGGGGAAG GGACGCAGCA CTCGTCCGGT GCCGGATTCG GGACCCTGAT GGTCACCGGG
GACCTCAAGC AGATGTCACC GGAGTACCTG CGTGCAGCCA CCATGCAGGG GTATGGGGTC
ACGATGTACA TCGGGGTAGG GGTGCCGATC CCGGTGGTTG ACCTCGAGGT TGTCCGGTCC
ACGGCAGTCA GAGACGAGGA TATCCTGGTC GATCTGGTCG ACTACGGGGT GCCGAGCAGG
TCACGTCCGG TTCTACGGCA GGTCAGTTAT GCCGACCTGA AGAGCGGAAC GATCGATCTG
AATGGGGAGG AGGTGACCGC CTCGTCGCTC TCGAGCTTCC GGATGGCCAG GCGGGTCGCG
GCGGACCTGA AAGAGCGGAT CCTTGCCGGA ACGATGTCGA TGACCCTGCC GACCCGGCAG
ATCGATCCGA ACAAGCTCGC CCACCCGATG CATGAGACGG TGCATGCCCC GCGGGTCTGT
GATATCATGG ACCGGCACCA GGTGAGCATC ACCGAGGACG AGGAGATCCG GACGGCGGCA
AAGAAACTGT TGAAGGGTGA GACCAACCAC CTGACGGTGC TGAATCTGGA GGGACGACTG
GTCGGGATGG TCACCACCTA TGACCTCTCC AAGGCCGTCG CCAACCCGGG GAAGGTCTCG
CTGGTCAGGG AGATCATGAC GAGAAAAGTG ATCACGACCA CACCCGATGA GGTGGTCGAC
GTTGCAGCCC AGAAACTGGA ACAGTATAAT ATCAGTGCCC TGCCGGTGAT CGATAAGGCC
GGCCGGGTGC TCGGCATGCT GACGGCACTT GACTTAGGAA AACTGTTCGG CAGGAGGTGG
ACACGATGA
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| Protein sequence | MEKSIGLINQ RIADGNATVV TAEEMPALVD ELGEEGALET VDVVTTGTFG AMCSTGAFLN
FGHADPPIRM ERVWLNDVEA YAGLAAVDAY IGATQQSTTR GDQYGGAHVL EDLVSGKQID
LRAISRGTDC YPRRTINTEL ILEDLNQATM CNPRNAYQRY NAATNTTDRT LHTYMGMLLP
NSGNITYSGA GLLNPITNDP KFRVIGSGTP ILLGGGQGMI VGEGTQHSSG AGFGTLMVTG
DLKQMSPEYL RAATMQGYGV TMYIGVGVPI PVVDLEVVRS TAVRDEDILV DLVDYGVPSR
SRPVLRQVSY ADLKSGTIDL NGEEVTASSL SSFRMARRVA ADLKERILAG TMSMTLPTRQ
IDPNKLAHPM HETVHAPRVC DIMDRHQVSI TEDEEIRTAA KKLLKGETNH LTVLNLEGRL
VGMVTTYDLS KAVANPGKVS LVREIMTRKV ITTTPDEVVD VAAQKLEQYN ISALPVIDKA
GRVLGMLTAL DLGKLFGRRW TR
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