Gene Mpal_1260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1260 
Symbol 
ID7271538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1288939 
End bp1289379 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content52% 
IMG OID643569894 
Productprotein of unknown function DUF55 
Protein accessionYP_002466318 
Protein GI219851886 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.706847 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.490077 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATTC CCCACTTTTG GATCATTGTG GCGTCCAGAG AACACGTGAT GGTTGGCGTC 
AAAGGCGGAT TTGCCCAGAC AGGACATGGG AAACGATCCG GTTTAGCCCG GATGCATGCC
GGTGATTCCA TTGTGTACTA CTCCCCAAAG AGGGTGCTGG GAGGGGATGA CCCGCTCCAT
GCATTCACGG CGTTGGGGAC CATTGCAGGC GAGGAGATTG TGCAGGTGGA GATGACGCCA
GACTTCAAAC CGTTCCGAAG AGATGTGAAG TACCTGTACA CGGGAGAGGT CAAGATCGAG
CCGCTCATCG AAGATCTCCA TTTCATCCGG AACAAAAAGT CATGGGGGTA TGCATTCCGG
TTCGGTCTCC TGGAGATCGA GAAAGAAGAT TTTAAGAGAA TCCTGCAGGA ATTCGAAAAA
GAGGGACAAA CGCCTGAATG A
 
Protein sequence
MNIPHFWIIV ASREHVMVGV KGGFAQTGHG KRSGLARMHA GDSIVYYSPK RVLGGDDPLH 
AFTALGTIAG EEIVQVEMTP DFKPFRRDVK YLYTGEVKIE PLIEDLHFIR NKKSWGYAFR
FGLLEIEKED FKRILQEFEK EGQTPE