| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0885 |
|---|
| Symbol | |
|---|
| ID | 7272378 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 914967 |
|---|
| End bp | 916415 |
|---|
| Gene Length | 1449 bp |
|---|
| Protein Length | 482 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643569530 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002465966 |
|---|
| Protein GI | 219851534 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGA ATTACCTTGC TGGCATTATT GTTCTGATTC TTGGCTTGAT GGTGCTCACA
GGCTGGGGAA TCGGTTTCTT TTCCGGTTCT ACACTCCAGA TGAGTGAAAA AAACGTCAAC
ATGATCTTCG TGATAACCCC GGACCTGGCC AACGACCCGC TGGGAGACAT AAACCCGGAT
ACGGCAAACC TGAACAATCA GGGTTTCCAG CGCTCGCTCC TCATGGGTTC GTACCTGAAG
CAACGTGTGG GAACAGGTAA CGTAACCGCC ATCTACGCCC TTGAACCGAT GACCCATCTC
CAGACCGTGA ACAATTCCCC TGATATGGCA GCGATCGGGT TCATTCAGCA GTTCGCCCTC
CTCAATCAGG TAACGATACA GAATACGACC GGCAACAGTT ACCCGCTCTA TGCAGGGTAT
GCACCGGGGG ATGTGCCCAC TGGAGTCGCC GAGCCGAGTC CGTTCGTGCC CGCCGCCCAG
GGACTGGCTT TCAACGACAC CCACGGAAAC AATGCTGCCC TGCTGACCGG TATCATAGAC
GCAGAGAAGC CGGGGTCCTA TGTCTTCTCG GCTCCCTGGG AGACCATCAG CGACCTGCTG
ACGAGAATCA ATACAGCCAA GGGGTACAAT CTGACGCTTC CCACGTCATA CAAGGGATCG
AATTTTGTCT ATGTCCTCTC CGTTACACCG GCCGGAAAAG CCAGCCTGGC CACGCTCGAC
AGCAGACTGA ACCCGTCTGC GACGTATCCA GAACTCCCCT CGCCGGTCGC ACGTGCTTCA
TCTACACTCC AGACCCCTTT CAGCTATAAC CGGACGGCGG GGGTTGACGG TGCCACCATT
CCGGCGAAGA TCAACACCAA CGAGACGGTT TACCTGATCA GGCATGCAGA AGCGCATCCG
TCGAGCAGTT TTGAAGACGG CAACTACGTG GGCGCCGGAC AGTGGCGGGC GCTGGCGCTT
CCCAGTTTTC TCCCCAATGC CCTGCGTGGC CAGAGGAGTC CCACGATGGT TTATTCCATC
GACCCCGCTC AATCCTTCCC AATTCTCAAT TGTTCCTATG CCAGGCCCTC ATTAACGGTA
TTTCCCTATG CTATCGCCAA CAATCTGTCC GTCAATCTTG CTGCGAGTTT TCTTTTGGGC
ATAAATGCAA CATCAGAAAC AGCGGCGGAA AACGCGAGTA ACTTCTTCTT TACGAACAGT
ACCGGAATCA ACCTATCCAA CCAGACGATC CTGGTGGCAT GGGAGCATGA GCACTTCCCT
TCTCTGATAA AATACCTTGT CGACAGTTAT GGCGGCACTG CCCTGGCCCC GAATTTAACC
TGGCCGTCCA ACGACTATGA CACGATCTGG ACAGTGAAGA TCGATACCAT GGGCAATCTG
ACGGTGGACA ATGCACTGCG CGAAGGAATT GACTCTTCGA AGCTCCCGGC CGATGCTCCG
AAATTCTAA
|
|---|
| Protein sequence | MKKNYLAGII VLILGLMVLT GWGIGFFSGS TLQMSEKNVN MIFVITPDLA NDPLGDINPD
TANLNNQGFQ RSLLMGSYLK QRVGTGNVTA IYALEPMTHL QTVNNSPDMA AIGFIQQFAL
LNQVTIQNTT GNSYPLYAGY APGDVPTGVA EPSPFVPAAQ GLAFNDTHGN NAALLTGIID
AEKPGSYVFS APWETISDLL TRINTAKGYN LTLPTSYKGS NFVYVLSVTP AGKASLATLD
SRLNPSATYP ELPSPVARAS STLQTPFSYN RTAGVDGATI PAKINTNETV YLIRHAEAHP
SSSFEDGNYV GAGQWRALAL PSFLPNALRG QRSPTMVYSI DPAQSFPILN CSYARPSLTV
FPYAIANNLS VNLAASFLLG INATSETAAE NASNFFFTNS TGINLSNQTI LVAWEHEHFP
SLIKYLVDSY GGTALAPNLT WPSNDYDTIW TVKIDTMGNL TVDNALREGI DSSKLPADAP
KF
|
|---|
| |