| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0272 |
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| Symbol | |
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| ID | 7270658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 303749 |
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| End bp | 304612 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643568922 |
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| Product | transcriptional regulator, TrmB |
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| Protein accession | YP_002465378 |
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| Protein GI | 219850946 |
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| COG category | [K] Transcription |
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| COG ID | [COG1378] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.369583 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACGA TCACCCCGGC GCTGGTGAAG GCACTGAAGG TGCTTGGGCT CTCCGAGTAC
CAGGCAAAGG TCTATGCGGC GCTGGTCCTC CTCGACCAGG CGCAGGCGAA AGAGGTGATC
GAACTGCTCG GGATCTCCAA GCCGAGTGTG TACGAAAGTC TCGACTCCCT GGATGACCTC
GGGCTGGCCG TCCGGATCAG CGCCAAGCCG GCGGTCTTTC AGGCGATATC CCCTGAGATA
GCCGTTAAGA TCCTGATGGA TACCCACACC CGGGCCGGAA CTTCGGCCCT GACCGAACTG
CAGGCCCTTC AGCAACAGAC CTTCTCGGGG AGACGCTCCG GCCGACTCTG GGCGATGTAC
GGAAAGGAGA ATCTGGATTA CAAAATCGAC GAGATGCTCA GAGAGGCGAA GGAGAGTGTA
TTTGCGGTGA TCTCGGACCG GTATCTCGAT CTCTTCAAAC AGATCGCAGG TCGTGGTCTC
CAGGTCTGGC TGGTGGTGAT CTCTGAAGAT CCAGAGATCG AGGAGGAACT CCACACACTC
TTTTGCGGGG ACCACGAGGA GGTGCTGGTC ACCTCCCCCA TGGTGTTGAT GATACCGCTG
ACGACGGATC CTGACCTGGC AGAGATGACT GACGAGTTCA GGTTCTCCAA CCAGCTCGAC
CTGATCGTCG ACGATGCCGA GGCTCTCTCG GTGCCGCCGA TCGAGACCGA CCTGCTGACC
GGTCTTGACT CCCAGAACAG GACTGTTGTG CTGCTCGCTA AGAACAGGAA CATGATGATA
TGGCAGATGT TGCAGCAGAT GGTGAAGGAG GAGCTATCGA CGGGGGATGA TCGGGATGAG
TCCATGAGCC CGCTCTCTGA CTGA
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| Protein sequence | MMTITPALVK ALKVLGLSEY QAKVYAALVL LDQAQAKEVI ELLGISKPSV YESLDSLDDL
GLAVRISAKP AVFQAISPEI AVKILMDTHT RAGTSALTEL QALQQQTFSG RRSGRLWAMY
GKENLDYKID EMLREAKESV FAVISDRYLD LFKQIAGRGL QVWLVVISED PEIEEELHTL
FCGDHEEVLV TSPMVLMIPL TTDPDLAEMT DEFRFSNQLD LIVDDAEALS VPPIETDLLT
GLDSQNRTVV LLAKNRNMMI WQMLQQMVKE ELSTGDDRDE SMSPLSD
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