| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0222 |
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| Symbol | |
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| ID | 7270607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 255691 |
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| End bp | 257931 |
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| Gene Length | 2241 bp |
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| Protein Length | 746 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643568874 |
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| Product | efflux transporter, , hydrophobe/amphiphile efflux-3 (HAE3) family |
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| Protein accession | YP_002465331 |
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| Protein GI | 219850899 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | [TIGR00921] The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTCAG TGTTTGAACC GATCGGTCAT CTGATATCCC GACACCCGGG TGCCGTAGCG
GTAGGCTTCC TCTGCCTGCT GCTGATCACC CTCTATGGGA CGACGATGAT CACGATGAAC
ACGGGGTCCA GCACCTATAT GGACAAGTCG ACCGAGGCTG GGATCCTCTT CGATACCTAT
ACCCGGACCT TTGACTCCAA TGCGGTGGTG CTGCTGGTCG AGTCCTCAGA CGTGCTCAGC
CCCGACATCG TCCGGTATAT GGACCAGGTC GAAACGGCGC TCCGTGAGCA GCAATACATC
GGGCAGGTCA GTTCTGTCTC TGATCTGATG CGCCAGATGA ACCAGGGAAA CCTCCCGACC
TCTGAAGGGG AGATCCTCGC CATTGAGCAG AATGTTCCGG CCAGTGTCCT TTCACAGTAT
GTTCCTTCGA AGGACACGAC GATGGTGAAG ATCAGTCTGC AACAGGGTAT CTCTGACGAC
CGCTCCACCA GTGTGCTTGG GAATATCCAG TCGGTGATCT CGTCGGTCGA AAAACCCCCA
GGTGTCACCA TCTCGATGAC CGGGAACGCT GCGTTTAATA AACAAATGCA GAGTGAAATC
GGGAAATCTA CCGCGGTGCT GGTTGCTGCT GCGATGCTCC TGATGGTCCT GACACTCGGA
CTCCTCTTCT CCTATGTGAG CCAGAGGTTC CTGCCGGTGC TGGTCGTCGC GTTCGGGCTG
ATCATGACGT TTGGGACCAT GGGGCTCGCT GGGATCCAGA TGAACCTGGC GGTGGTCGGA
GCATTCCCGA TCATCATAGG GCTCGGGATC GATTATGCGA TCCAGTTTCA TGCCCGGTTC
GACGAGGAGG CCGGGCAATC GTCCCGGGAA GAGGCTGCAT TTACCACGAT CACCAAAACT
GGCCCTGCTG TCCTCTATGC GATGCTCGCG ACCTCGCTCG GGTTTGCAGC CCTCTCGATC
TCCCCGGTTC CGATGGTAAG GTCCTTCGGA TTCGTTGCGA TCCTCGGGGT GATGTTCTGC
TATCTGTCGT CCCTGATCTG CGTGCCGATG ATCGCACTGT TGACCAAGTA CACGCCCAAA
AGAAGCCACC AGCCCTCTGC CGGTGCCGGT GGATACAGTC GGTTCCTTGC ATCGATGGCG
GTGAAGATCG CCCATAATCC GGTGCCTGTG ATCCTGATTG CGGCCCTGGT GGCCTTTGCC
GGAGTGCAAC TCGACAGCAG CATTCCGATC GATACCAATC AGAACACCTT TGTCCCCGGG
GACATGCCGG CCCGACTCAG CCTGAACAAA GTCACCTCGA TGATCGGCTC CACTGATCCG
CTCCCTCTCT ATGTGTCCGG CGTCGGACTC AATGATCCGG AGGTTCTCAA ATGGATGGAC
ACGTTTGAGA GTACTGAGAT GACGAAACAC AGCGAGATGC TGGGGGTCAC GAGCATCGCC
AGTGTCATCA AGGAGTACAA TGGTGGGGTG CTGCCGACGA CCTCTGCAGG TGTGGACGCC
GTGATGGCCA GGATTCCCTC CTCGGTCAAG GACCAGTACC TGGATGGAAC GAGTGCGGCC
CTGATCACCT TCAGCACTGT CCAGATGGAG ATGCCTGAGA AGAACTCGCT GAAAGAGCAG
ATTCTCAGTG AGATCACGTT CTCTGAGCCG CCGGTAGGGA TTCAGGTCAA ACCGACCGGG
AACTTCGACC TGTTCACCTC GCTGATCAAT GATATCGCGT CAGGGAAGGA CAGGATGACC
GGGCTCGGGT TCGGGCTGAT CCTCGCCTTC CTGCTGCTCG TCTATCGGAA GCTCGATGCC
GCGACTCCGC TGATCCCGAT CATCTTCATC GTCGGCTGGA ACCCGGTGGC GATGACGATC
CTCGGCCTCG ACTACACCCC GATCACCGCG GTGCTCGGGT CGATGACGAT CGGGGTCGCC
GCAGAGTACA CGATCCTGAT CATGGAGCGG TACCTCGAGG AGCGAGAGAA GACCGGGGAT
GTCTATGATG CGATCCAGCA GAGTGTCCAG AAGATCGGGA CCGCGATCAC CGTATCCGGC
CTGGCGACCT TCTTTGGGTT CTCTGCGCTG ATCCTCTCCT CCTTCCCGGT GATCAGCAAC
TTCGGGATAT CGACCATCGT CGCGGTCCTC TTCTCGTTGA TCGGCGCGAT CGTCGTGATG
CCGGCGGGCC TGTCGCTGAT GGATACATTA GAGCGGTATG TGCAGAGGCA CCGGGCAGGA
GCGGCTCATC CGACTGCCTG A
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| Protein sequence | MRSVFEPIGH LISRHPGAVA VGFLCLLLIT LYGTTMITMN TGSSTYMDKS TEAGILFDTY
TRTFDSNAVV LLVESSDVLS PDIVRYMDQV ETALREQQYI GQVSSVSDLM RQMNQGNLPT
SEGEILAIEQ NVPASVLSQY VPSKDTTMVK ISLQQGISDD RSTSVLGNIQ SVISSVEKPP
GVTISMTGNA AFNKQMQSEI GKSTAVLVAA AMLLMVLTLG LLFSYVSQRF LPVLVVAFGL
IMTFGTMGLA GIQMNLAVVG AFPIIIGLGI DYAIQFHARF DEEAGQSSRE EAAFTTITKT
GPAVLYAMLA TSLGFAALSI SPVPMVRSFG FVAILGVMFC YLSSLICVPM IALLTKYTPK
RSHQPSAGAG GYSRFLASMA VKIAHNPVPV ILIAALVAFA GVQLDSSIPI DTNQNTFVPG
DMPARLSLNK VTSMIGSTDP LPLYVSGVGL NDPEVLKWMD TFESTEMTKH SEMLGVTSIA
SVIKEYNGGV LPTTSAGVDA VMARIPSSVK DQYLDGTSAA LITFSTVQME MPEKNSLKEQ
ILSEITFSEP PVGIQVKPTG NFDLFTSLIN DIASGKDRMT GLGFGLILAF LLLVYRKLDA
ATPLIPIIFI VGWNPVAMTI LGLDYTPITA VLGSMTIGVA AEYTILIMER YLEEREKTGD
VYDAIQQSVQ KIGTAITVSG LATFFGFSAL ILSSFPVISN FGISTIVAVL FSLIGAIVVM
PAGLSLMDTL ERYVQRHRAG AAHPTA
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