| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0220 |
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| Symbol | |
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| ID | 7270605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 252843 |
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| End bp | 254141 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643568872 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_002465329 |
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| Protein GI | 219850897 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCAC CTTCAGAGGA ACTGCGGAGG ATCAGGGAGA TCCTGAAGCA GATACCGCAG
GGGATGAGTG TGACCGAGAT TGCACGCGCC CTCGGAAAGA ATAAACACTC TGTCGGGAGG
TACTTGGACA TTCTGCGAGT CTCCGGTCAT GTCGAGATGA GGAACTACGG GATGGCCAAA
GTCTTCACCC TCTCCCAGCG GATTCCACTC AGCGCCCTCC TCTCCTTTCC CTCTGAGATG
ATCATGGTCC TCGACCAGGA GCACCGGATC GGACAGATCA ACGACCAGTT CCTACAGTTC
CTGCAGATTG AGCGCGGAGA GGTAGTCGGA CGGCAACTGG AATACCTGCC AGTCCCAAAC
CCAGCGGTCC ATGACCTCGT CCTACAACTG CTCGCTGCAC TGAACGGGGA GGAAGTCGCG
GACGAACTTG AGATTCCCAC CGACCCGGCC AGAATATTTA AATTAAAAGC TGTTGCGACG
GTATTCGATG ATGGGACACA GGGGATGACT GTGATCCTTG AGGATATCAC CGCCCAGAAG
CAGGCAGAGC AGGCACTGAA ACAGAGCGAA GCGCTCTTTC GGGGGATGGC TGAGAACATT
CAGGATGGGC TGGTCATCAG CAGGGACCGG GAGATGGTCT ACGTCAACGA GCGGGCTGCC
GCAATCCTCG GTTATCCGCG TGACGAGATC TTTGCGATGA CTGCCCTTGA TGTGATTGCT
TCTGAAGAGC AAGAGCGGGT CAGGCCCCTG GTCGATGAAT ACAATCAGTC AGGCGGGGTG
CCCAAAGAGC TTCGATTCTG GATCGTCCAG AAGAGCGGAA AACGGCGGTA CCTCTCCGCC
CGCCTCTCCT CAATCGATCA TGAGGGGGAT CATATCGCAT ATATCGTGCT GACCGATATG
ACCGAATGGA AGGAGGCCGA AGATACACTG AAACGGCAGT ACCTGTTTGT CCACCACTTC
ATCGATGCCT TCCCTCGCCC GATCTACTGT CTGAATCCGG ACCGGCGGTT CCTCGAATGC
AACCAGGCCT TTGAAGAGAT GGTCGGGCGA TCCCGGGCCG TGATCATCGG AGCCAAGACG
GCTGACGTCT TCCCTGCAGA GGACCTAGCA GTGTACGAGC AGGGGGACGA CGACCTATTT
CTGGAACCGT CCACCAGCAC ATACGAGGCA ACCCTGCAGT TCCCCGATGG ATCCAGACGG
CAGATGACGA TCGAGAAGGC CACGCTCAGA TCCCCCGAGG AAGGGGCCTC CTTAACCCTG
ATCGGAAACC TGATCGAGCG CGGACGGCAG CAGCACTGA
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| Protein sequence | MKPPSEELRR IREILKQIPQ GMSVTEIARA LGKNKHSVGR YLDILRVSGH VEMRNYGMAK
VFTLSQRIPL SALLSFPSEM IMVLDQEHRI GQINDQFLQF LQIERGEVVG RQLEYLPVPN
PAVHDLVLQL LAALNGEEVA DELEIPTDPA RIFKLKAVAT VFDDGTQGMT VILEDITAQK
QAEQALKQSE ALFRGMAENI QDGLVISRDR EMVYVNERAA AILGYPRDEI FAMTALDVIA
SEEQERVRPL VDEYNQSGGV PKELRFWIVQ KSGKRRYLSA RLSSIDHEGD HIAYIVLTDM
TEWKEAEDTL KRQYLFVHHF IDAFPRPIYC LNPDRRFLEC NQAFEEMVGR SRAVIIGAKT
ADVFPAEDLA VYEQGDDDLF LEPSTSTYEA TLQFPDGSRR QMTIEKATLR SPEEGASLTL
IGNLIERGRQ QH
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