Gene Mnod_4484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_4484 
Symbol 
ID7302227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp4536392 
End bp4536973 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content72% 
IMG OID643602129 
ProductRNA polymerase sigma factor 
Protein accessionYP_002499655 
Protein GI220924353 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.76377 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAGAC CTCGCAAACG CCTCGACGTC GTGGATCTGA TCGTGCCGCT GCGCCGCTAT 
GCGCGCGCCC TGACCCGCGA CGCGACCCAG GCCGACGACC TCGTGCACGA TGCGCTGCTG
CGCGCCCTGG AGCACCAGGG GGCGCTGAAG AGCGGAACCA ACCTGCGCAC CTGGCTGATG
ACGGTGCTGC ACAACGCCTT CATCGACGGC CAGCGCCGGC GGCAGGTCGA GGCACGCTAC
GCCGATACGC TGGAGCACCT CGCCGACGAG GCGGTGCCGC CGGCCCAGGA CAGCCACGTG
CGCCTCGCGC AGATCCGCGA GGCCTTCTCC CGGCTGCCGG AGGAGCAGCG GGCCGCCCTC
CACCTCGTGA CCATCGAGGG CATGGCCTAC CAGGAAGCCG CCGACGTCCT CGGCATCCCG
ATCGGGACGC TGATGTCGCG CCTCGGGCGG GGGCGGGCGG CCTTGCGCAA TTTCGAGAAC
GGACAGGGCC GCCTGCCGTC CGCGGAACCC GAGACGCCGC GCTCCCCGCC GCGCCTGCGC
GTGGTCCAGG GGGGAAGCCC GTCCGTGGAG TTCGACTCAT GA
 
Protein sequence
MMRPRKRLDV VDLIVPLRRY ARALTRDATQ ADDLVHDALL RALEHQGALK SGTNLRTWLM 
TVLHNAFIDG QRRRQVEARY ADTLEHLADE AVPPAQDSHV RLAQIREAFS RLPEEQRAAL
HLVTIEGMAY QEAADVLGIP IGTLMSRLGR GRAALRNFEN GQGRLPSAEP ETPRSPPRLR
VVQGGSPSVE FDS