Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mnod_4484 |
Symbol | |
ID | 7302227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium nodulans ORS 2060 |
Kingdom | Bacteria |
Replicon accession | NC_011894 |
Strand | - |
Start bp | 4536392 |
End bp | 4536973 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643602129 |
Product | RNA polymerase sigma factor |
Protein accession | YP_002499655 |
Protein GI | 220924353 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.76377 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGAGAC CTCGCAAACG CCTCGACGTC GTGGATCTGA TCGTGCCGCT GCGCCGCTAT GCGCGCGCCC TGACCCGCGA CGCGACCCAG GCCGACGACC TCGTGCACGA TGCGCTGCTG CGCGCCCTGG AGCACCAGGG GGCGCTGAAG AGCGGAACCA ACCTGCGCAC CTGGCTGATG ACGGTGCTGC ACAACGCCTT CATCGACGGC CAGCGCCGGC GGCAGGTCGA GGCACGCTAC GCCGATACGC TGGAGCACCT CGCCGACGAG GCGGTGCCGC CGGCCCAGGA CAGCCACGTG CGCCTCGCGC AGATCCGCGA GGCCTTCTCC CGGCTGCCGG AGGAGCAGCG GGCCGCCCTC CACCTCGTGA CCATCGAGGG CATGGCCTAC CAGGAAGCCG CCGACGTCCT CGGCATCCCG ATCGGGACGC TGATGTCGCG CCTCGGGCGG GGGCGGGCGG CCTTGCGCAA TTTCGAGAAC GGACAGGGCC GCCTGCCGTC CGCGGAACCC GAGACGCCGC GCTCCCCGCC GCGCCTGCGC GTGGTCCAGG GGGGAAGCCC GTCCGTGGAG TTCGACTCAT GA
|
Protein sequence | MMRPRKRLDV VDLIVPLRRY ARALTRDATQ ADDLVHDALL RALEHQGALK SGTNLRTWLM TVLHNAFIDG QRRRQVEARY ADTLEHLADE AVPPAQDSHV RLAQIREAFS RLPEEQRAAL HLVTIEGMAY QEAADVLGIP IGTLMSRLGR GRAALRNFEN GQGRLPSAEP ETPRSPPRLR VVQGGSPSVE FDS
|
| |