Gene Mnod_4399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_4399 
Symbol 
ID7303041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp4447360 
End bp4448163 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content68% 
IMG OID643602047 
Producttwo-component response regulator 
Protein accessionYP_002499573 
Protein GI220924271 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0784] FOG: CheY-like receiver
[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.042433 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGACAG CACAACTCGT CGTGCAGCAC CTGCCGTACC TGCGCCGCTA CGCGCGCGCG 
CTGACCGGCA GCCAAGTGGC CGGCGATGCC TACGTGGCCG CGACGCTCGA AACGCTCGTC
AACGAGCCCG AAACGCTGGG CCGCAGCGCG AACGTCAAGG CGGATCTGTT TCGGGTTTTC
ACGCGGATCT GGAACTCGCT CTCGGTGAAC GGCCAGATCG AGCAGGTGCA GCACGACCTC
CCGGCCGAGG TGCGGCTGGG GCAGATCACG CCTCTGCCGC GCCAGGCCTT CCTGCTGTCC
TGCCTGGAGG GATTCTCGGA GGAGGATGCC GCCACCATCC TGGGCGTCGA TGTCTCCGAG
GTGCGCGACC TCGTGGACGA AGCGGGCCGC GAACTCGCCG CCGACATGGC GACCGAGATC
CTCATCATCG AGGACGAGCC GCTCATCGCC ATGGATCTCG AAGCCCTGGT CGAGGGGCTC
GGCCACAACG TGACCGGCGT CGCGCGCACC CGCTCGGAAG CCATCAAGCT CGCGGAAGGC
CGCCGACCGG GCCTGATCCT GGCCGACATC CAGCTTGCGG ACGGCAGTTC GGGCCTCGAT
GCAGTCAATG ACCTGCTCAA GACCTTCGAG GTGCCGGTGA TCTTCATCAC CGCCTATCCG
GAGCGCTTCC TCACCGGCGA GCGGCCGGAA CCCGCCTTCC TCATCGCCAA GCCCTTCCAG
CCCGCGAACG TCTCGGCGGT GATCAGCCAG GCGCTGTTCT TCCAGCAGAG CGCCCGCCGC
CGCGAGGCCA AGGCCGCCGT CTGA
 
Protein sequence
MSTAQLVVQH LPYLRRYARA LTGSQVAGDA YVAATLETLV NEPETLGRSA NVKADLFRVF 
TRIWNSLSVN GQIEQVQHDL PAEVRLGQIT PLPRQAFLLS CLEGFSEEDA ATILGVDVSE
VRDLVDEAGR ELAADMATEI LIIEDEPLIA MDLEALVEGL GHNVTGVART RSEAIKLAEG
RRPGLILADI QLADGSSGLD AVNDLLKTFE VPVIFITAYP ERFLTGERPE PAFLIAKPFQ
PANVSAVISQ ALFFQQSARR REAKAAV