Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mnod_4387 |
Symbol | |
ID | 7303029 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium nodulans ORS 2060 |
Kingdom | Bacteria |
Replicon accession | NC_011894 |
Strand | + |
Start bp | 4436708 |
End bp | 4438690 |
Gene Length | 1983 bp |
Protein Length | 660 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643602035 |
Product | transketolase |
Protein accession | YP_002499561 |
Protein GI | 220924259 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0021] Transketolase |
TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGCCG CCGACCCCCG CCGCATGGCC GATGCCATCC GCTTCCTCGC CCTCGACGCC ATTGCCCGCG CCGGCGACGG CCACCCAGGC GCCCCGCTCG GCTGCGCCGA GATCGCGACC GCGCTGTTCA CGCGCCACCT CGTCTGCAAC CCCGACGATC CGGAATGGCC GAACCGCGAC CGCTTCGTGC TCTCGAACGG CCACGGCTCG ATGCTGCTCT ACGCAGCGCT CCATCTCGCC GGCTATGCGG GCATCTCCCT CGACGCCATC AAGTCCTTTC GGGAACTCGG CTCGCCCTGC CACGGGCACC CGGAATTCGC GCCGCATCAC GGCATCGAGG CGACGACCGG GCCCCTCGGC CAGGGCATCG CCAATGCGGT CGGCATGGCG GTGGCGGAAG CCAGGCTCGC CGCCGAGTTC GGTCCCGACC TCGTCGACCA CCGCACCTAC GCCCTCGTCG GCGACGGCTG TCTGATGGAA GGCATCGCCC ACGAGGTGAT CTCGCTCGCC GGCCACCTGC GGCTCGGCAA GCTCACCTTC CTGTGGGACG ACAACCGCAT CACCGACGAC GGCAGCACCG ACCTGTCGAT CTCGGAGGAT GTGCGCGCCC GCTTCCGGGC GGCCGATTGG CAGGTGATCG ACTGCGACGG CCACGACGTG GAGGCGGTCT CGGCGGCGCT CCTCCTCGCC AAGGGGGACC CGCGCCCGAG CCTCATCGCC TGCCGCACGA TCATCGGGCG CGGCCTGCCG CGTCTCGAAG GGCAGCGCGG CGCCCATGGC GGGCGGGTCT TCGACAGCGA TTGCGCGGAG GCACGGGCGG CCCGCTTCTG GGACCATCCC GCCTTCACGG TGCCGGAGGA CGTGCTCGCG GCCTGGCGCG ACGGCGCGGG TGCGCGCAAC CGCGCCGCCT ATGCGGCGTG GCAGGAGCGC CGGGCGGCGT CGCCTGCCGC GATCCGCACG GAGTTCGACC GCCGCGCGGA GGGGCGCCTG CCCGACGCGT GGCGCGAGAC CCTCGTCGGC CTCAAGCGCC ACTGGACCGA GACCGCGCCC GAGCGCCCGA CGATCGAGGT GGCGGCCGAC ATCCTGGCCG CGCTCACCGA GACGATCCCC GACCTGTTCA GCGGCGCCCC CGACCTCGAG GGGCCGACGA AGCACAAGCA GGCGCTGCCC GCCTTCACGG CGCAGAATCG CGGCGGGCGC TACCTCCATT ACGGCATCCG CGAGCACGCC ATGGGGGCGA TGATGAACGG CATGGCCGCC CATCGCGGCC TGATCCCGGT CGGTGCCACC TATCTGGTCT TCTCCGATTA TCTTCGCCCG GCCCTGCGCA TGGCCGCGCT GATGGAGCTG CCGGTCATCA CGGTCTACAG CCACGATTCG ATCGGCATCG GCCGCAACGG CCCGACCCAC CAGCCGGTGG AGTTCCTGGC CTCGCTGCGC GCGATTCCCA ACATGCTGGT GCTGCGCCCG GCCGATGCGG TCGAGACCGT CGAAGCCTGG GAGATGGCGC TCGCGAACCG GCACGGGCCG ACCTCGCTGA TCTGCTCGCG CCAGCCGCTG CCGCCCCTGC GGCGCAGCCC GGGCGGGGAG AATCTCAGCG CGCGGGGCGC CTACGTGCTC GCCCAGGCCG CGGGCGGGCG CCAGAAGGTC ACGCTGATCG GTACCGGATC GGAGGTGGCG GTGGCGCTCG ATGCCCGTGC GCAGCTCCAG GCGGAGGGCA TCCCGACTTC CGTGGTGTCG ATGCCGTCCT GGGACGCCTT CGCGGCGCAA CCCGACTCCT ACCGTGCGGA GGTGATCCCG CCCGGCACCG TCCGGGTCGC CGTCGAGGCG GCGGTGCGTC TCGGCTGGGA CCGCTGGATC GGGGAGAACG GCGGCTTCGT CGGCATGACG GGCTTCGGCG CCTCGGGCCC GGGCGAGGAA CTCTTCCGCC ATTTCGGCAT CACTGCGGAT GCGGTGGTGC GGGAGGCCAG GGCGCGGCTC TGA
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Protein sequence | MAAADPRRMA DAIRFLALDA IARAGDGHPG APLGCAEIAT ALFTRHLVCN PDDPEWPNRD RFVLSNGHGS MLLYAALHLA GYAGISLDAI KSFRELGSPC HGHPEFAPHH GIEATTGPLG QGIANAVGMA VAEARLAAEF GPDLVDHRTY ALVGDGCLME GIAHEVISLA GHLRLGKLTF LWDDNRITDD GSTDLSISED VRARFRAADW QVIDCDGHDV EAVSAALLLA KGDPRPSLIA CRTIIGRGLP RLEGQRGAHG GRVFDSDCAE ARAARFWDHP AFTVPEDVLA AWRDGAGARN RAAYAAWQER RAASPAAIRT EFDRRAEGRL PDAWRETLVG LKRHWTETAP ERPTIEVAAD ILAALTETIP DLFSGAPDLE GPTKHKQALP AFTAQNRGGR YLHYGIREHA MGAMMNGMAA HRGLIPVGAT YLVFSDYLRP ALRMAALMEL PVITVYSHDS IGIGRNGPTH QPVEFLASLR AIPNMLVLRP ADAVETVEAW EMALANRHGP TSLICSRQPL PPLRRSPGGE NLSARGAYVL AQAAGGRQKV TLIGTGSEVA VALDARAQLQ AEGIPTSVVS MPSWDAFAAQ PDSYRAEVIP PGTVRVAVEA AVRLGWDRWI GENGGFVGMT GFGASGPGEE LFRHFGITAD AVVREARARL
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