Gene Mnod_2889 details

Gene Information

• Locus tag: Mnod_2889
• Symbol: rimM
• ID: 7304061
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylobacterium nodulans ORS 2060
• Kingdom: Bacteria
• Replicon accession: NC_011894
• Strand: +
• Start bp: 2978091
• End bp: 2978705
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 643600597
• Product: 16S rRNA-processing protein RimM
• Protein accession: YP_002498143
• Protein GI: 220922841
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0806] RimM protein, required for 16S rRNA processing
• TIGRFAM ID: [TIGR02273] 16S rRNA processing protein RimM

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCAGCGGG ACCCGGCCGG CGCGCCGCGC CCCGCGGGCG CGTCCGCGGC GGCTCCCGAC 
CTCGCCGGGG ATCCGGCCTT CGTGCTGCTC GGCGAGTTCG GCCGCGCCCA CGGCCTCCAG 
GGCGAGGTGC GGCTCAAATC CTACACGGCC GATCCGATGG CGATCGGCTC TTACGGCCCG 
CTCACGGGGG CGAACGGGCG CGCCATCGCG CTGACGGCGC TGCGCCCGGC CTCCGGCGCG 
CCCGATATGC TGATCGCGCG CGTCTCCGGG GTCTCGGGCC GCGACGCGGC CGAGGCCCTC 
AACCGCCTCG CCCTTTATGT CCGCCGCGAG TGCCTCGGCG CGCCGGAGGA CGAGGACGAG 
TTCTTCTCCG CCGACCTCAT CGGCCTTGCC GTCGTCGATG CGGCGGGCAC GCGGCTCGGC 
ACGATCCGGG CCGTGCCGAA TTACGGCGGC GGCGATCTCC TGGAGATCGA GCCTACCGGC 
GGCGGCGCCG CGGCGCTGCT CCCCTTCACC CGTGCCTTCG TGCCGAAGGT GGACATCGCC 
GCGCGCGAGG TGACGATCGA TCCGCCCGAT GACCTTTTCG CCCCGGCCAA ACCATCGCCG 
GAGGACGAAG TTTGA 

 

Protein sequence

MQRDPAGAPR PAGASAAAPD LAGDPAFVLL GEFGRAHGLQ GEVRLKSYTA DPMAIGSYGP 
LTGANGRAIA LTALRPASGA PDMLIARVSG VSGRDAAEAL NRLALYVRRE CLGAPEDEDE 
FFSADLIGLA VVDAAGTRLG TIRAVPNYGG GDLLEIEPTG GGAAALLPFT RAFVPKVDIA 
AREVTIDPPD DLFAPAKPSP EDEV