Gene Mnod_2019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_2019 
Symbol 
ID7305208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand- 
Start bp2117620 
End bp2118327 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content59% 
IMG OID643599753 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002497308 
Protein GI220922007 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCTCC CCGGTGTCGC CGCCCAGGAA CCGCTCACGA CAGTTTCGGA GAAGTCCAAG 
CAAGCTGTCC GGCGACGCCT GCCGGCTGCG CAGCGCGAGC AACAGATCGT CGAGGCCGCA 
GCGCAGTTCT TCGCTGAGCA CGGACTTGCC GGGCAGACGC GCGAGCTTGC CCGTGAAATC 
GGCATCACGC ATTCGGCGAT CTTCCGATAC TTTCCCACCA AGGAGGCACT GCTCGATCGG 
GTCTATGAGC ATGTCTATGT CCAGCGTTGG AACCCGGCTT GGGGCGGAAT CGTGCAGGAC 
CGGTCGCAGC CGCTTGAGGC GCGGATCCTG CGCTTCTACG GAGAGTACGC CGAGAAGATC 
TTCGACTACG TATGGGTGCG GATCTTCGTG TTTTCGGGAC TTAAGGGTTA CGACATCGCC 
CCCCGCTATC TCGGCATCGT CCGCGACCGG GTGATCCACC CCATCTGCAC GGAGATGCGA 
GCGGAACTCG GCTTGCCTGC CCCTGAGATC GTGCCGTTGA CCGAGCGCGA AACCGAAGCA 
GTGTGGGCTT TGCACGGGAA GATTTTCTAC CTGGCGATCC GTAAATTCGT CTATGGCTGG 
CCGATCCCTA GCAATGTTTC TCAAATCATA TCTGATGATG TCGGCGCGTT TCTACGAGGT 
TCGCCGCCGA TCTTTGTAGA CTGCGTGAAA AATTCGGTCA AAGACTAG
 
Protein sequence
MDLPGVAAQE PLTTVSEKSK QAVRRRLPAA QREQQIVEAA AQFFAEHGLA GQTRELAREI 
GITHSAIFRY FPTKEALLDR VYEHVYVQRW NPAWGGIVQD RSQPLEARIL RFYGEYAEKI 
FDYVWVRIFV FSGLKGYDIA PRYLGIVRDR VIHPICTEMR AELGLPAPEI VPLTERETEA 
VWALHGKIFY LAIRKFVYGW PIPSNVSQII SDDVGAFLRG SPPIFVDCVK NSVKD