Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_4427 |
Symbol | |
ID | 5365423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | + |
Start bp | 5031968 |
End bp | 5032741 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640806833 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001343257 |
Protein GI | 152998422 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACTCAGT CTGATTCCGA TGTTTTCAGC CTACCTACCG AAGCGGACGC CCACGATCAT GATTACCATC AACTGGTGGT TGTGCTAGAT GGCAATACCG ATTTCGATAT AGAAGGCAAA AGCAAGCAGT TGCATACTGG CGAAGGTTGT ATCCTTCCGT CAGAGAACAG CCATGCGTTT GCGGGTCTGG GTGAAAATCG CATCATGGTG GTCAATCTGC CTATTCCGCC GCAAAAAGGT ATTACCGACG AAGAATACGA AGTCGTATCA CGTTTGTTTG ACCAAGCAGC GTATTTTCAG CTTAATCCGC GTTTACAGAT ATTGGCCTCT GCCCTGTCTG GTGAATTACA GCAGTATCCA AATGATATGA TTCTGGCTCG CGCTTGCGGC AACACTTTAT TGAGCGCCAT TCGCCACCAA ATAAATAATA AAGATGTACG TTCTCGTGGC AACCATCTTG ATATCGATAA ACTGGACCAG TTTATCGAGC TAAATTTATC TCGCCGTGTT CATATCGATC AGTTGGCAAA CTTCTGCTTT TTAAGTGTTA GCCAGTTTCA CGAGCGCTTC AAAGACCGCA CCGGCATGAC ACCACATCAA TACTTAATGC GTAAACGTCT AGAACGCGCC CAAAGCTTAC TCGCTGAAGG TTTCCCGCCT ATTCAAGTGG CCGAAATGTG TGGTTTCTCT AGCCAAAGCG CCATGACCAA TGTGTTTTCT CAAACCCTTG GCATTACGCC ATTAAAATAC CAAAAGCAAT TTGGTAATCG CTAA
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Protein sequence | MTQSDSDVFS LPTEADAHDH DYHQLVVVLD GNTDFDIEGK SKQLHTGEGC ILPSENSHAF AGLGENRIMV VNLPIPPQKG ITDEEYEVVS RLFDQAAYFQ LNPRLQILAS ALSGELQQYP NDMILARACG NTLLSAIRHQ INNKDVRSRG NHLDIDKLDQ FIELNLSRRV HIDQLANFCF LSVSQFHERF KDRTGMTPHQ YLMRKRLERA QSLLAEGFPP IQVAEMCGFS SQSAMTNVFS QTLGITPLKY QKQFGNR
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