Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_3922 |
Symbol | |
ID | 5366270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | + |
Start bp | 4423661 |
End bp | 4424875 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640806310 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001342754 |
Protein GI | 152997919 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGATAG CAATTCCCAA CTTACGGCAT TTGCGTGTAT TTCTCGCGGT CGCAGAGCTA AAAAGCATCA CCCGAGCTTC TGAAAATATC TTTTTATCTC AGCCAGCCAT CACTCAAGCG ATCGCTAAGC TAGAAGGATT ATTGGGCGCG TCGCTTTTTG AGCGCCATTC AGATGGTATG TATCCCACTC CATCTGGTGA GGTGTGGCAA AAACGCGTCA GCCGCGCCAT CGATCATATT CAAACCGCTA CACAAGAAAT CGTGAAAGAC ACGACTCAAA AAGAACGCAC ACCTAAAAAT CTCATCGCCT TAATTAGCAC CACCCAATTA AGAGCTTTAG TCGCTGTGAG CGAAGCACAA AACTTCAGCA TTGCGAGCCG AAATTTGGCC GTGTCGCAGT CTTCCGTACA CCGAGCCGCA CGAGATTTAG AACGCCTGCT CGGCGTTGTA TTATTCGAAA AAAATAGCCT TGGAACCAGC GCAACCAAAG CAGCACAAAC CTTGGCAAAA GCCACCAAAC TGGCTTTCAG TGAATTACGC CAAGGCATTT ACGAGATCAA CGCTTTACAG TTTAAAGATG TCAGTACCAT CACCATAGGC AGTATGCCTT TGGCACGTAT GACCATTTTG CCCAAATCAA TTTTGCAGTT CAACGAACGC CATCCTGATG TAAATATCAA TGTAACCGAA GGCCCGTATG CCGATTTACT TCATCACCTT CGCCAAGGCG ACATTGATAT TATTTTAGGT GCATTACGTC ATCCAACACC GGCTGACGAT GTGGTGCAGG AAGAATTATG GGCGCCGCCA TTGTCAGTAG TGGCTCGTAA AGATCATCCA TTAATGAGCA AACAAAACAT CAGCGCACAA GATCTCGCCG AGTTTGCTTG GGTCGTTCCA GCCAAAGGCA CACCGACTCG ACAAGCTTTC GAAGACATTT TCAAAGACGC CGGTATCGCC TTACCAACAC GATTAGTTGA ATCCAGTTCA CAGATACTCA TTCGTGAGCT ATTAATCGAA AGCGATCGAT TGACACTCAT CTCGGCACAC CAAGTGGAGC GAGAAATTAA TATTGAATTG CTCAATATCA TAGACTTTCC GTTGGACCAT ACACGCCGCC CAATTGGGCT TTGTGTGCGA AAAAGCTGGC TTCCAACCGT CACTCAATCC CACTTTTTAA GCTTATTACG AGATATTTCA GAACGTTTTC GATGA
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Protein sequence | MEIAIPNLRH LRVFLAVAEL KSITRASENI FLSQPAITQA IAKLEGLLGA SLFERHSDGM YPTPSGEVWQ KRVSRAIDHI QTATQEIVKD TTQKERTPKN LIALISTTQL RALVAVSEAQ NFSIASRNLA VSQSSVHRAA RDLERLLGVV LFEKNSLGTS ATKAAQTLAK ATKLAFSELR QGIYEINALQ FKDVSTITIG SMPLARMTIL PKSILQFNER HPDVNINVTE GPYADLLHHL RQGDIDIILG ALRHPTPADD VVQEELWAPP LSVVARKDHP LMSKQNISAQ DLAEFAWVVP AKGTPTRQAF EDIFKDAGIA LPTRLVESSS QILIRELLIE SDRLTLISAH QVEREINIEL LNIIDFPLDH TRRPIGLCVR KSWLPTVTQS HFLSLLRDIS ERFR
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