Gene Mmcs_5270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_5270 
Symbol 
ID4114097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp5557450 
End bp5558532 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content70% 
IMG OID638034426 
Productdiguanylate cyclase 
Protein accessionYP_642427 
Protein GI108802230 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATGGG TGGGTAGATG GTGGCGACAG CCCGACCATT TCGATTGGCT CAGCGGTTAT 
CTGCAGACCC GCGGAATGGC CACCGCGATG CGCCGAGGGC TGGCGCTGGT CGCCGCATCC
TTGGCGTTGG TGCCGGTCAA CGCGCTGTGG GGGCCTGCCT CCATCGACGA CCGGTTGGCG
GTGAGTCTCG CCCTGGTGGC TTCGCTGGCG GGGCTGAGCC TGGCGGTGCT GTGGCTCAAG
CGCTGGCCCA CCAGAACGGA GTCGGTGCTG TTCGCCGCAA TCGGCAGCGC AACCATCGCC
GGCGGCTGCC TCTGGCAGGC GGAGCCCCTG ATCGGCCTGA CGTTCTGCAC CGCGCTCGCG
GTGTCCGGCG GGTACATCGC GTTCTTCCAC ACGGCCAGGT ACATGCTGAT GAACTTCGTG
CTGGCGGTGG GGGTGGGCGC CTGGCAGGCG ATCCGGGTGG CCGCCGAGGG TGAACCCGTG
CTGGCCCTCA CCGGCTACTT CCTGGTGCTC GAACTGAACA TCGGTGTGCC GTTCGCCATC
CAGGTCGTGG TGCGCTCGCT CGGTACCGAC CTGCTGCAAT CCGACCGCGA TCCGCTCACC
GGACTCCTCA ACCGGCGGGC GTTCACCCAC GCCGTGGTCG GACGGCTGGT GGCTCGCGCC
GACCGGGCCC ACCTGGCGGT GGCGTTGATC GACCTCGACC GGTTCAAGGC GATCAACGAT
CGGCACGGCC ACGCCAGCGG GGACGCCGCC CTGGTCGACG TCGCCGGGGC GTTGACGGCC
GCGGTCACCG AGACCGCGCT GGTGTGCCGT ATGGGTGGCG AGGAGTTCCT GATCGCCGAC
ATCGTGGCGT CGGCCGCGCC GACGGAGTGG GCCCAGGGGC TGTGCGCGGC GGTGACGTCG
ACACCGTTCC GGCTCACGGC CAGCGTCGGC ATCGCCACGG TCCCGCTGCG CGACGTCAAA
CCGGAGCAGG CCGACGAGAC GTTCCGCCGA TTGGTCACCG AGGCCGACGC CGCCATGTAC
GCCGCCAAGC GGCGCGGCGG CAACCAGATC CAGCACGCCG GGGACGCCCG AACCCCTAGG
TGA
 
Protein sequence
MQWVGRWWRQ PDHFDWLSGY LQTRGMATAM RRGLALVAAS LALVPVNALW GPASIDDRLA 
VSLALVASLA GLSLAVLWLK RWPTRTESVL FAAIGSATIA GGCLWQAEPL IGLTFCTALA
VSGGYIAFFH TARYMLMNFV LAVGVGAWQA IRVAAEGEPV LALTGYFLVL ELNIGVPFAI
QVVVRSLGTD LLQSDRDPLT GLLNRRAFTH AVVGRLVARA DRAHLAVALI DLDRFKAIND
RHGHASGDAA LVDVAGALTA AVTETALVCR MGGEEFLIAD IVASAAPTEW AQGLCAAVTS
TPFRLTASVG IATVPLRDVK PEQADETFRR LVTEADAAMY AAKRRGGNQI QHAGDARTPR