Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3553 |
Symbol | |
ID | 4482508 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 4460661 |
End bp | 4461068 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639724302 |
Product | cytochrome c, class I |
Protein accession | YP_867444 |
Protein GI | 117926827 |
COG category | [C] Energy production and conversion |
COG ID | [COG3474] Cytochrome c2 |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000573518 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTTT CCCACATTGC CCTCGCCGCT GCGTTGACCG TTGTTGGTTT CGCTGGTTCT GCTCACGCTG CCGATGACGC AGTTATGAAC AAGTGCCGCG CTTGTCACAC CTGGGAAGCG GGCAAAAAAG GCAAGCAAGG TCCCAACCTG TTTGGTATCG TAGGCAGTGC TGCTGGTAGC AACGCTGATT TCAAATATAA CAAGAGCTCT GTGCTGCCAG ACGTTGGCGC TAAGGGTGTG GTATGGGACG CCGCTCTGAT TGACGAGTAT CTCCAAGATC CCACCAAGTT CTTGCAACGG GTGTTGGGCG ATGCCAAAGC CAAGTCCAAG ATGACCTTCA AGCTCAAGGG TGCGGATAAA GCCGATGAGC GTGCTGCGAT CATTGAGTTC CTTAGCAACA ATAAGTAA
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Protein sequence | MKFSHIALAA ALTVVGFAGS AHAADDAVMN KCRACHTWEA GKKGKQGPNL FGIVGSAAGS NADFKYNKSS VLPDVGAKGV VWDAALIDEY LQDPTKFLQR VLGDAKAKSK MTFKLKGADK ADERAAIIEF LSNNK
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