Gene Mmc1_3553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3553 
Symbol 
ID4482508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4460661 
End bp4461068 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content52% 
IMG OID639724302 
Productcytochrome c, class I 
Protein accessionYP_867444 
Protein GI117926827 
COG category[C] Energy production and conversion 
COG ID[COG3474] Cytochrome c2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000573518 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTTT CCCACATTGC CCTCGCCGCT GCGTTGACCG TTGTTGGTTT CGCTGGTTCT 
GCTCACGCTG CCGATGACGC AGTTATGAAC AAGTGCCGCG CTTGTCACAC CTGGGAAGCG
GGCAAAAAAG GCAAGCAAGG TCCCAACCTG TTTGGTATCG TAGGCAGTGC TGCTGGTAGC
AACGCTGATT TCAAATATAA CAAGAGCTCT GTGCTGCCAG ACGTTGGCGC TAAGGGTGTG
GTATGGGACG CCGCTCTGAT TGACGAGTAT CTCCAAGATC CCACCAAGTT CTTGCAACGG
GTGTTGGGCG ATGCCAAAGC CAAGTCCAAG ATGACCTTCA AGCTCAAGGG TGCGGATAAA
GCCGATGAGC GTGCTGCGAT CATTGAGTTC CTTAGCAACA ATAAGTAA
 
Protein sequence
MKFSHIALAA ALTVVGFAGS AHAADDAVMN KCRACHTWEA GKKGKQGPNL FGIVGSAAGS 
NADFKYNKSS VLPDVGAKGV VWDAALIDEY LQDPTKFLQR VLGDAKAKSK MTFKLKGADK
ADERAAIIEF LSNNK