| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3381 |
|---|
| Symbol | |
|---|
| ID | 4483317 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 4212735 |
|---|
| End bp | 4214156 |
|---|
| Gene Length | 1422 bp |
|---|
| Protein Length | 473 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639724129 |
|---|
| Product | periplasmic sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_867273 |
|---|
| Protein GI | 117926656 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCTGG CGCTGCTGCC GCGCACCCTC TCTGGGCAAC TGCTGCTGAT TTTGATGACC
GGCATCTCCA TGGTATTGGC TTTAAGTGCG GTGCTCCATC TGCATGAACG CAGTGAGGCG
CTCTCGAACT ACGGCAGTAT TCAAGCGGCC TATCGGTTAA AGGGGGTGGT GGAGAATCTG
GATCCGCTGT TGCCGCAGCA ACGGCAGCAG ATTCTGGGTC TGATGGAGAG TTCGCTGCAA
TTTATACAGA TTATCGCGCC CAGCTCGGAT GCGGTGATTG GCGATGCACC CTCGCACCCT
ATGGCCCAGC AGTTTTTACA GCGTTTACAG AGCGTATTTG GGGTGGGTTG GCAGATACGC
GTTAAAATGT TGCAGTGGCA AGGCCCCCCC GAAACGCAGG ATGTACACCA GCGCCACCAC
CGTCAACATA TGGGGGGCAT GCAGCGCATC TTTCCCGATG GTCTCTCCTT TTTGGCGCAG
GTGCAACTGC GGGATGGCAA CTGGGTTGAG TTTCACAACC ATCTGCCCAA AGAGGTGTTT
GATCGCCCCG ACCATCTTTT TGGGGCGCTG TTGGCGCTGT TCATAGGGGT GATGCTGTTG
GCGGTGGTGG CGGTGCGGTT GACCACCCGT CCCTTGACCC TGTTGGTGCA GGCGGCCCAT
GGTTTGGGGG AGGATCTCAA TCGTCCCCCC TTACCCGTAC AGGGTTGCCG TGAGCTGCGG
CAAACGGCCC AAGCCCTCAA CAGCTTGCAG GCCCGTATTA AACGCCATGT GCAGGAGCGC
ACGCAGCTGT TGGCGGCCAT TTCCCACGAT CTGCGTACCC CCTTAACCCG CATGCAACTG
CGCACCGAGC GGCTCATTGA AGGGGATGTT CAGCACGCCT ATTTTCAAGA TATCAAAGAG
ATGGAGCAGA TGATTCAGGG GGCGATGGCC TTCATCCAAG GCATGGAGCA GCAGGAGCCG
TGGCAGCGGG TGGATCTGGC GGCGATGCTG GAGCGGTTAC AGGAGGAGTT TGCCGAAATG
GGCTACACCA TCACTCTGGA TGTGCCCGAT CATCTGCCCT TTTGGGTCAT GCGTACCAGT
TTGAAGCGGG CACTAAGTAA CCTCATAAGC AATGGGGTGC AGTATGGCCA ACGGGTGGCG
GTGAGCGCCA TCGCTGAAGG GGATGGGGTT AAATTGAGCA TCCGCGATCA TGGTCCGGGC
ATCCCTGAGT CGGAATTTGC ACGGGTGTTG GAGCCCTTTA CCCGGTTGGA GGCCTCCCGC
AGCCGTCATA CCGGTGGGGT GGGGTTGGGG CTGGCCATTG CACGCAATAT TATCCAGGCG
CACGGGGGAG GGTTGCGGTT GCACAACCAT CCCGATGGGG GGTTGCAGGT GGATGTCATG
TTGGTGGCCA AAGATCCGCC ATCACCGCAT AAACCCGTAT AG
|
|---|
| Protein sequence | MRLALLPRTL SGQLLLILMT GISMVLALSA VLHLHERSEA LSNYGSIQAA YRLKGVVENL
DPLLPQQRQQ ILGLMESSLQ FIQIIAPSSD AVIGDAPSHP MAQQFLQRLQ SVFGVGWQIR
VKMLQWQGPP ETQDVHQRHH RQHMGGMQRI FPDGLSFLAQ VQLRDGNWVE FHNHLPKEVF
DRPDHLFGAL LALFIGVMLL AVVAVRLTTR PLTLLVQAAH GLGEDLNRPP LPVQGCRELR
QTAQALNSLQ ARIKRHVQER TQLLAAISHD LRTPLTRMQL RTERLIEGDV QHAYFQDIKE
MEQMIQGAMA FIQGMEQQEP WQRVDLAAML ERLQEEFAEM GYTITLDVPD HLPFWVMRTS
LKRALSNLIS NGVQYGQRVA VSAIAEGDGV KLSIRDHGPG IPESEFARVL EPFTRLEASR
SRHTGGVGLG LAIARNIIQA HGGGLRLHNH PDGGLQVDVM LVAKDPPSPH KPV
|
|---|
| |