Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2978 |
Symbol | |
ID | 4482706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 3703400 |
End bp | 3704092 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639723725 |
Product | hypothetical protein |
Protein accession | YP_866875 |
Protein GI | 117926258 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.135615 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.80837 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATTA AGGGATGGAT AAAAAAAGGG CGTAGCTGTC TGCTGTTGCT GTTGGGCACA CTGCTGATGG TGGGTTGCTC CATGGGTACG GACCGCTCGT TTGTACTAAA AGATGCGCTG CCCCGCCAGA TGACGGTGGC GGTACTGCCC TTTGAAAATT TGAGCAACAA CCCTAATGGC GGATTGATTG TCGCTCAACT CCTTTCCACC GAGCTCTACC ATCGGCAGAT TTTTCAGCAG ATGGAAGAGA CCGAAATGCG CCGCCTATTA ACCCAGAACA AGGTGGATAT GGATCGCCTG TCCGATGTCT CACTGGCCCG CAAGGTTGGG CTGATGTTGG GGGTGGATGC GGTGATTCTG GGCAGCGTTT CGGAGCTTTC GTATCAACAC GGTCTGCGCG AGGAGCCTGC GGTGGGCTTT AATGTGCAAC TGCTGCGGGT TGCGGATAGC AAGGTGGTGT GGCGGGGCAG TCAATCGTTG ATGGGCAGTG GCTGGCTGCG TCGTGAGAGC CTCATCTACA CCGCCCAGCA GGCGGCCAGT CAGTTGGTGG CGCGCATGGA TCACGGGTAT GGGGCCGACG GCTCAAAGAC CGCCCCGACA GCAGCCAGCG CTACCCAGCC AAGCGGCACG ACCGCCGCCC TTGCACCCAC AGCGGAAGCC CCGGCCACCG TGCCTGCGCA TTCGGAACCC TAA
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Protein sequence | MKIKGWIKKG RSCLLLLLGT LLMVGCSMGT DRSFVLKDAL PRQMTVAVLP FENLSNNPNG GLIVAQLLST ELYHRQIFQQ MEETEMRRLL TQNKVDMDRL SDVSLARKVG LMLGVDAVIL GSVSELSYQH GLREEPAVGF NVQLLRVADS KVVWRGSQSL MGSGWLRRES LIYTAQQAAS QLVARMDHGY GADGSKTAPT AASATQPSGT TAALAPTAEA PATVPAHSEP
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