Gene Mmc1_2978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2978 
Symbol 
ID4482706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3703400 
End bp3704092 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content59% 
IMG OID639723725 
Producthypothetical protein 
Protein accessionYP_866875 
Protein GI117926258 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.135615 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.80837 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTA AGGGATGGAT AAAAAAAGGG CGTAGCTGTC TGCTGTTGCT GTTGGGCACA 
CTGCTGATGG TGGGTTGCTC CATGGGTACG GACCGCTCGT TTGTACTAAA AGATGCGCTG
CCCCGCCAGA TGACGGTGGC GGTACTGCCC TTTGAAAATT TGAGCAACAA CCCTAATGGC
GGATTGATTG TCGCTCAACT CCTTTCCACC GAGCTCTACC ATCGGCAGAT TTTTCAGCAG
ATGGAAGAGA CCGAAATGCG CCGCCTATTA ACCCAGAACA AGGTGGATAT GGATCGCCTG
TCCGATGTCT CACTGGCCCG CAAGGTTGGG CTGATGTTGG GGGTGGATGC GGTGATTCTG
GGCAGCGTTT CGGAGCTTTC GTATCAACAC GGTCTGCGCG AGGAGCCTGC GGTGGGCTTT
AATGTGCAAC TGCTGCGGGT TGCGGATAGC AAGGTGGTGT GGCGGGGCAG TCAATCGTTG
ATGGGCAGTG GCTGGCTGCG TCGTGAGAGC CTCATCTACA CCGCCCAGCA GGCGGCCAGT
CAGTTGGTGG CGCGCATGGA TCACGGGTAT GGGGCCGACG GCTCAAAGAC CGCCCCGACA
GCAGCCAGCG CTACCCAGCC AAGCGGCACG ACCGCCGCCC TTGCACCCAC AGCGGAAGCC
CCGGCCACCG TGCCTGCGCA TTCGGAACCC TAA
 
Protein sequence
MKIKGWIKKG RSCLLLLLGT LLMVGCSMGT DRSFVLKDAL PRQMTVAVLP FENLSNNPNG 
GLIVAQLLST ELYHRQIFQQ MEETEMRRLL TQNKVDMDRL SDVSLARKVG LMLGVDAVIL
GSVSELSYQH GLREEPAVGF NVQLLRVADS KVVWRGSQSL MGSGWLRRES LIYTAQQAAS
QLVARMDHGY GADGSKTAPT AASATQPSGT TAALAPTAEA PATVPAHSEP