| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2169 |
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| Symbol | |
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| ID | 4483980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 2665986 |
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| End bp | 2667791 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639722913 |
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| Product | peptidase M3A and M3B, thimet/oligopeptidase F |
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| Protein accession | YP_866076 |
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| Protein GI | 117925459 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1164] Oligoendopeptidase F |
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| TIGRFAM ID | [TIGR02290] oligoendopeptidase, pepF/M3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.944442 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAGC CTGAGATGGC CCAACAGTGG CGGCTGGATA ATCTCTATGA AAATCTGGAT
GATCCGCAGA TTGAGGCAGA TCTGCTGGAT TTAGAGCAGC GCTATGCGGC CTTTTTTCGT
CAGTTTCGAG GGCAGTTGTC CAGCGATCTT GGGGCGGCCG TACGGGCCAA CGAGGCGCTG
AGTGAGCGCA GCGGCAAGCT CTATCTCTAT TTGCATTTAA GGATGTATGC AGACCTTAAT
GACGAAGCGG TGAAAAAACG GCTGTTTGAG GTAAAAACCC GGCTGGATCG AACCTTTGGT
GAGCATGCCT CGTTTTTTAC CATTGAGATT GCGCAGATGG CTGAAGAGAG GTTTCAGGCA
CGCTTGCAAG AGCCCGATTG TGCCTTTTTC CGCCCATGGT TGGAGCAGGT ACGGCGTAAT
TTGCCCTATA TGCTGAGCGA AGAGGTGGAG GGGGCACTGA CCAAGCGTTC AGCCTTTGGT
GCGGAGAGTT GGGCGGAGTT CTATGATGAG GTGGAGGCGG ATTTGCGCTT TGATTACCAG
GGGCGCGCGC AAACCTTGAC AGAGATGCTG CACACCCTCA ACACCAGTCA AGATGGGGAG
CAGCGGGCCG AGGTGCAGCG CTTGGTCAAT CAGGGTTTGC AGGGGGCGTT CTCCAAATTT
TCGGCGCAAA CGCTCAATAT GGTGGTGGGT GCCAAACGTA TTGAGGATCG TGAGCGGGGT
TACAGCCACC CCATGCAGGC CCGTAACCTA AGCAATAAGG TGCCTGATGC GGTGGTGGAG
GCCCTGCACC AAGCGGTCAC CACCCAGGCG GCGCCCTTGG CCCAGCGTTA TTATCGTTTA
AAAGCGACCC TGTTGGGGCA AAAAACCCTG CGCTGGAGCG ACCGCAATGC ACCGCTGCCC
TTTACCGCCA ATGTGGAGAT TCCCTATCAC GAGGGGTTGG ATCTGGTGCT GCAAGCCTAC
CACAGCTTTA GCCCGACCTT GGCGCAAATG GTAGAAGCTT TTCAGCAACA GGGGCGCTTT
GATGTGGCGC CACGTCCGGG CAAGCAGAGC GGCGCGTTTA ACTATTCGGT GGTTTTGCCG
GGTGGCGAGC CGGTATCCTA CATTTTACTC AATCACCAAG GTTCCATGCG GGATGTCATG
ACCCTCGCCC ATGAGGTAGG GCATGGTGTA CACGGTATGT TAGCGGGCCA TGCCCAGGGT
GCCTTGATGG CCAGTGCCCC CATGGCCTAT GCTGAGACGG CCTCCATCTT TGGGGAGATG
ACCACCTTTA ACTTTTTGCG TGAACGTTTG CAGCAAGCGG GGGATCACAT CGGTCTGTTG
GCGCTGCTGA CCGGTAAGAT TGAGGATATT TTAAACTCCG TGGTGCGGCA AATCGGTTTT
TCCAACTTTG AGCGGCGGGT ACATGGGGCC GATTCACGTC TTTCTGCGCA TGAGTTGGAT
GCGATCTGGA TGGAGACCAC CCAGGCTCTC TATGGGGCTG AAGGGGAGGT CTTTACCTAT
GCCGATAGTA ACGCTTTGTG GAGCTATATC AGCCATTTTC ACCGCCCTTT TTATGTTTAT
GCCTACGCCT TTGGTGAGCT GCTGACCCAA AGTCTATATG CCAGCCGGGC AGGGGTAGGG
GCGGTATTTG AAGCCAGCTA TTTGGATCTA CTACGCGCCG GGGGGACTAA GGATGTGGTG
GAGCTGCTGA AACCCTTTGC TCTGGATCCG ACCGATATGG ATTTCTGGCA GCATGGCATT
GATATTAGCC TCGGTGCATT GATTGCAGAG GCCGAGGTGG TTGCCAAGCA GGCTGGGGTG
CTGTAG
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| Protein sequence | MNKPEMAQQW RLDNLYENLD DPQIEADLLD LEQRYAAFFR QFRGQLSSDL GAAVRANEAL
SERSGKLYLY LHLRMYADLN DEAVKKRLFE VKTRLDRTFG EHASFFTIEI AQMAEERFQA
RLQEPDCAFF RPWLEQVRRN LPYMLSEEVE GALTKRSAFG AESWAEFYDE VEADLRFDYQ
GRAQTLTEML HTLNTSQDGE QRAEVQRLVN QGLQGAFSKF SAQTLNMVVG AKRIEDRERG
YSHPMQARNL SNKVPDAVVE ALHQAVTTQA APLAQRYYRL KATLLGQKTL RWSDRNAPLP
FTANVEIPYH EGLDLVLQAY HSFSPTLAQM VEAFQQQGRF DVAPRPGKQS GAFNYSVVLP
GGEPVSYILL NHQGSMRDVM TLAHEVGHGV HGMLAGHAQG ALMASAPMAY AETASIFGEM
TTFNFLRERL QQAGDHIGLL ALLTGKIEDI LNSVVRQIGF SNFERRVHGA DSRLSAHELD
AIWMETTQAL YGAEGEVFTY ADSNALWSYI SHFHRPFYVY AYAFGELLTQ SLYASRAGVG
AVFEASYLDL LRAGGTKDVV ELLKPFALDP TDMDFWQHGI DISLGALIAE AEVVAKQAGV
L
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