| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1885 |
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| Symbol | |
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| ID | 4483584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 2343687 |
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| End bp | 2344454 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639722630 |
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| Product | triosephosphate isomerase |
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| Protein accession | YP_865799 |
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| Protein GI | 117925182 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000744734 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.534473 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCGAG CTTTAATTGC TGGTAACTGG AAGTTGAACG GTACGACCCA AGCGGCCACA
GCCCTAGCCA CCGCTGTGCG GGATGGTGTG GCCGCAAACA AGCCCGATTG CGATGTATTG
GTGTGCCCCA CCTTTACCGT GCTCAGTGCG GTGCAGGGGG TTGTGGCCGG TTCAGGTGTG
GATCTTGGTG CGCAAAATAT GGCTGTTGCC AGCAGTGGCG CGTTTACCGG TGAGATCTCC
GGTGAGATGC TCAAGGATGT TGGCTGTAGC TATGTGATCC TGGGCCATTC TGAGCGGCGC
ACGCTGTTTG GTGAAACCAA TGAACAGGTG GCACAAAAGG TAGCCTCTGC CTATCGGGAT
GGTTTGACCC CCATTCTTTG CGTGGGTGAG ACCCTAGAGC AGCGTGAAGC GGAACAGACC
ATGCAGGTGT TGGAGCAACA ACTGCTGGCC TGCTTGCCGG TGCTGCCCGC TGATGCGGCA
AAACAGCAGC AACTGGTGGT GGCGTATGAA CCGGTTTGGG CCATTGGCAC CGGAAAAGTG
GCCAGCACCG CCCAGGCGCA AGAAGCCCAT GCCTTTATCC GTGGTCTGCT GGCTAAAGAG
TTGGGGGCCA ATGTGGCCGA TGCGGTACGT ATTCTCTATG GCGGTTCCAT GAAACCCGAT
AATGCCAAGG AATTGTTGGG ACAAGCCGAT GTGGATGGCG GTTTGATCGG CGGGGCAGCA
TTAAAGGCGA ATGATTTCCT TGCCATCATG GATGGTTTAA CGGCATAA
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| Protein sequence | MRRALIAGNW KLNGTTQAAT ALATAVRDGV AANKPDCDVL VCPTFTVLSA VQGVVAGSGV
DLGAQNMAVA SSGAFTGEIS GEMLKDVGCS YVILGHSERR TLFGETNEQV AQKVASAYRD
GLTPILCVGE TLEQREAEQT MQVLEQQLLA CLPVLPADAA KQQQLVVAYE PVWAIGTGKV
ASTAQAQEAH AFIRGLLAKE LGANVADAVR ILYGGSMKPD NAKELLGQAD VDGGLIGGAA
LKANDFLAIM DGLTA
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