Gene Mmc1_1285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1285 
Symbol 
ID4480598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1577777 
End bp1578343 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content51% 
IMG OID639722028 
Producthypothetical protein 
Protein accessionYP_865202 
Protein GI117924585 
COG category[R] General function prediction only 
COG ID[COG1896] Predicted hydrolases of HD superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.197601 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTGAAA AGCGTTTAGG CTCCTGGATC CAGACTTTTG CCGGCAAACA GTTCTGGCCA 
ATGGATGCTC GCCCTGGTGA AGTGGACATT CAAGATATCG CTCATGCTCT CTCTATGCTG
TGTCGCTTCA ATGGTCACTG TAATCGCTTC TATTCTGTAG CGGAGCACTC TGTCCATCTA
TCCAGAGTGG TGGAGCCACA GCATGCTCTA TGGGGATTGC TTCATGATGC AGCAGAAGCC
TATGTGTCAG ATGTTCCAAG GCCGGTGAAG CAGCATGTTG AGCAGTTTAA AGAGATTGAG
AGCCAGCTCA TGGCCGTGGT TGCTGATTGT TTTGGGCTGC ATCCAGAACA GCCTCGTGAA
GTAAAAAAGG CTGACATGCA GCTATTGGCT ACAGAAAAGG TGGCCCTGAT GAAGCCTGAG
CCAGCCCCAT GGCCAGGATT GGTTCAGGGA CTGGATGGGG TGGAGATCCA TGGATGGAGC
CCGTCTGAGG CCAAACAGGC ATTTCTTGAC CGATTTGCAG AACTGATGTC CGACAGGGAT
CATGATATTT GCGCCAAAGC TTCATAG
 
Protein sequence
MCEKRLGSWI QTFAGKQFWP MDARPGEVDI QDIAHALSML CRFNGHCNRF YSVAEHSVHL 
SRVVEPQHAL WGLLHDAAEA YVSDVPRPVK QHVEQFKEIE SQLMAVVADC FGLHPEQPRE
VKKADMQLLA TEKVALMKPE PAPWPGLVQG LDGVEIHGWS PSEAKQAFLD RFAELMSDRD
HDICAKAS