| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1154 |
|---|
| Symbol | |
|---|
| ID | 4482764 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 1454175 |
|---|
| End bp | 1455647 |
|---|
| Gene Length | 1473 bp |
|---|
| Protein Length | 490 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639721897 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_865071 |
|---|
| Protein GI | 117924454 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTAAGG AGCTACCGCC ACTGCCGCCG ACCATGGCCA CACCGGCCCA AGATCGGCAG
TTGCAGCTGT TAAAAAATCA AACCAACCGG CTCTCCCAAC TGTTGTTGGT GGAGCAGCAG
GCGCGGGATG CCCAGAGCAT TCGTGAACTA TTGATGGTGG CGGTCAATGT AACCAAGCAG
ATTATACCGT ACCAAAGAGG CTTTGTTTGG CAAAAAGCGG GTAAAAAGAG TGTGCGGGTG
GTGGCGGCTT CGGGGGTCTC TAAGCTTGAT CGTCACGCGC CAATTATCTT GTGGCATGGG
CGGGTGTTGC AAACGGTGTT GCGGGGCTAC ACTCCACCAA AGCGCCGTGG TGATGAGGTT
CCTAAGGAGG GTGCCACCAA CCCGGCGGTG TTGGAGGGGG CGGTGCTGGT GACGCAAGAT
CAGTTACCCG CCAATCTGGC GCAGGAGTGG GCGGCGTGGA ACTGTGGTAC GGGGTTGTGG
ATTCCCTGGT TGGATAAACA GGGGGCGATT GTGGCGGGGT TCTATTTTGA CCGTCACGAG
GGGTGGCGGC AGGAAGAGGT GGAGCTGCTC AAGCGCATAG GGGCGACCTT TTATTACAGT
CTTAACCATT TGCAGTTACA AAAACAGCAT CGAAAAAACC CGCTCCTTAC CTTTTTGGGT
GATTTAAGCC TCTATAAAAA ATTGGCGCTG GTGGGGGCGG TGGGGCTCAT GCTGCTGCCG
GTGCGCCTGT CGGTTTTGGC CCCTTCTGAG GTGGTTGCTA AAACACCGTT TATGGTTAAT
GCGCCTATAG ATGGGGTGGT TAAAGAGATT TTGGTGCAAC CCAACCAGTT GGTGGAGCCG
GGCACCCCCC TGTTTACCCT GGATGACACC ACCATTCGCA ATAACTATGA GGTCGCCCGG
CAGGGTTTGG AGGTTGCCCG CGCCGAGCAT AGCAAGGCCG CGCAACAAGC CTTTTGGGAT
GCGGAGAGCA AAGCGCAGTT AGAGTGGTTG ACCGCACAAG TGGAAAAAAA GCGTGAAGAG
ATGGAGTATA ATGCGGAACT GTTGCAGCGC ATTCAGGTAC GCGCTCAACG GGGGGGTATT
GCCATTTTTT CCAATATCCA TGATTGGGTG GGTAAGCCGG TGCAGGTGGG GGAGCGGGTG
ATGCAGCTGG CTGATGCTCA AGATGTGGCT CTAAAGAGCT GGATTTCCGT TTCAGACGCC
ATCAATTTAG AACCGGGGGC ACAGGTGCGT CTGTTTTTAA ACGTCGACCC TATCCATCCC
CTAACGGCCC ATTTGCAGCG TGCCAGTTAT GAAGCAGTGC TCTCGCCCGA AGAGGTGCTC
TCTTACCTCA GTTATGCCGA CTTTACCCCT AGCCAATCCC CGCCGCGTAT TGGTTTAAAA
GGCACGGCCA AGGTGTATGG ACAGCGGGTT ACGCTGTTCT ACTATATTTT TCGCCGTCCG
CTCTCTTACT TTCGGCAACT GTTGGGCTTT TAA
|
|---|
| Protein sequence | MTKELPPLPP TMATPAQDRQ LQLLKNQTNR LSQLLLVEQQ ARDAQSIREL LMVAVNVTKQ
IIPYQRGFVW QKAGKKSVRV VAASGVSKLD RHAPIILWHG RVLQTVLRGY TPPKRRGDEV
PKEGATNPAV LEGAVLVTQD QLPANLAQEW AAWNCGTGLW IPWLDKQGAI VAGFYFDRHE
GWRQEEVELL KRIGATFYYS LNHLQLQKQH RKNPLLTFLG DLSLYKKLAL VGAVGLMLLP
VRLSVLAPSE VVAKTPFMVN APIDGVVKEI LVQPNQLVEP GTPLFTLDDT TIRNNYEVAR
QGLEVARAEH SKAAQQAFWD AESKAQLEWL TAQVEKKREE MEYNAELLQR IQVRAQRGGI
AIFSNIHDWV GKPVQVGERV MQLADAQDVA LKSWISVSDA INLEPGAQVR LFLNVDPIHP
LTAHLQRASY EAVLSPEEVL SYLSYADFTP SQSPPRIGLK GTAKVYGQRV TLFYYIFRRP
LSYFRQLLGF
|
|---|
| |