Gene Mmc1_1074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1074 
Symbol 
ID4481362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1314894 
End bp1315325 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content56% 
IMG OID639721823 
Producthypothetical protein 
Protein accessionYP_864998 
Protein GI117924381 
COG category[S] Function unknown 
COG ID[COG2445] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.673636 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.243145 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGATG ATGTGCTGCT TAATAAATCC GCCACGATTG AGCGCTGCGT GGCGCGTGCT 
CGGGAAGAGT ACAACAAAAA CCCGGAGACC TTCGCCCAGG ATTTTACCCG CCAAGACGCC
GCCATTCTCA ACATTCAACG CGCCTGCGAA GCCGCTCTGG ACGCCGGGCA GCACCTCATT
CGCCGGGAAC GCCTAGGCAT CCCCCAGGGG GCGCGCCATG TTTTTGAGTT GCTGGCCCAA
GCTGGCTGGA TCACCACCCA ACTGGCTGAT TCGCTCAAAC GCATGGTCGG CTTTCGCAAC
ATTGCCGTAC ATGACTACCA AACGCTACAA CTGCCCATTA CCGTCGCCAT CATCACCCAA
CATCTTGATG AATTGCTGGT TTTTACCCAA ACCATCCTTA AGCACCACAC CGGAGCAGCA
CCTGCGCCAT GA
 
Protein sequence
MVDDVLLNKS ATIERCVARA REEYNKNPET FAQDFTRQDA AILNIQRACE AALDAGQHLI 
RRERLGIPQG ARHVFELLAQ AGWITTQLAD SLKRMVGFRN IAVHDYQTLQ LPITVAIITQ
HLDELLVFTQ TILKHHTGAA PAP