Gene Mmc1_0943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0943 
Symbol 
ID4482742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1160822 
End bp1161697 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content56% 
IMG OID639721691 
ProductSecC motif-containing protein 
Protein accessionYP_864867 
Protein GI117924250 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000368461 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00751527 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAATGGC TGGCCGACAA CGATGCGGTC GCCAAAGATC CGCTGGTTAA GCGTTATGAA 
TTTTTTGCAC AGCGCCTGAC CGATATGGCC CCTCGCGCTG AGTTGGGATT TAAATCCCGC
ACCAATCGTC AAGCCCCGGC CCCCAAAATA GGCCGCAACG ATCCCTGCCC TTGTGGTTCG
GGTAAAAAAT TTAAAAGCTG CCACATTGAT CAAGCCGAGC AGTTGAGCTT TAAGTTGGGC
AACCCTACGG CCCCCATCAT GGCCACCGCC ACCGCCATGC TCATTAGTAA AATGGGCCTA
GAGGCGCTGG ATCAAGTTCC CCGCGACCAT CTTTCTGACC TCGTGGCCAG CGAAATGGCC
TCGGCCTACT ACCGTCACGA TGATATTGAC GCCGCCCTTG AGCTGTTGGA AGGGGTCATG
GATGGGGATC GTGAGCATGA ATATCTGCTC TACGATTATT GGATTGCCCG CTATGCCGAG
TGGCTGGTGG AGGTCGATCA GGGCAAGCAG GCTGAATCTT TCTTGCTGGA TGAGTATGAC
CACCCCAAGG GGGTAGAGCG TCATCAGGTT GCCCAAAAGC TGGCCGCCTT CTACCTGGAC
CAAGGGGACC CCAGCAACGC GGAGATCTGG GCCGACACCG CCCTGGAGCA GGATGCCCAC
AACCCCTTTA ACCACTATCT CAAGGGGCTT ACCCATCATG CTACCGGCAA CTGGGAGCGT
GCCATTATCG CCTATGAAAC CGCCATTGAG CACACCCAAC ACCTCGCCGA GCAAGAGCAG
CAGGCCCTGC AAGCGATGAT TAATGACGCC CTGGACAAGG CCAAACGTCA GGAACTTCCC
GATGTTGAGT CAGACGAAAG CCCGACAGAA GTGTAA
 
Protein sequence
MQWLADNDAV AKDPLVKRYE FFAQRLTDMA PRAELGFKSR TNRQAPAPKI GRNDPCPCGS 
GKKFKSCHID QAEQLSFKLG NPTAPIMATA TAMLISKMGL EALDQVPRDH LSDLVASEMA
SAYYRHDDID AALELLEGVM DGDREHEYLL YDYWIARYAE WLVEVDQGKQ AESFLLDEYD
HPKGVERHQV AQKLAAFYLD QGDPSNAEIW ADTALEQDAH NPFNHYLKGL THHATGNWER
AIIAYETAIE HTQHLAEQEQ QALQAMINDA LDKAKRQELP DVESDESPTE V