Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0943 |
Symbol | |
ID | 4482742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 1160822 |
End bp | 1161697 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639721691 |
Product | SecC motif-containing protein |
Protein accession | YP_864867 |
Protein GI | 117924250 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000368461 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00751527 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAATGGC TGGCCGACAA CGATGCGGTC GCCAAAGATC CGCTGGTTAA GCGTTATGAA TTTTTTGCAC AGCGCCTGAC CGATATGGCC CCTCGCGCTG AGTTGGGATT TAAATCCCGC ACCAATCGTC AAGCCCCGGC CCCCAAAATA GGCCGCAACG ATCCCTGCCC TTGTGGTTCG GGTAAAAAAT TTAAAAGCTG CCACATTGAT CAAGCCGAGC AGTTGAGCTT TAAGTTGGGC AACCCTACGG CCCCCATCAT GGCCACCGCC ACCGCCATGC TCATTAGTAA AATGGGCCTA GAGGCGCTGG ATCAAGTTCC CCGCGACCAT CTTTCTGACC TCGTGGCCAG CGAAATGGCC TCGGCCTACT ACCGTCACGA TGATATTGAC GCCGCCCTTG AGCTGTTGGA AGGGGTCATG GATGGGGATC GTGAGCATGA ATATCTGCTC TACGATTATT GGATTGCCCG CTATGCCGAG TGGCTGGTGG AGGTCGATCA GGGCAAGCAG GCTGAATCTT TCTTGCTGGA TGAGTATGAC CACCCCAAGG GGGTAGAGCG TCATCAGGTT GCCCAAAAGC TGGCCGCCTT CTACCTGGAC CAAGGGGACC CCAGCAACGC GGAGATCTGG GCCGACACCG CCCTGGAGCA GGATGCCCAC AACCCCTTTA ACCACTATCT CAAGGGGCTT ACCCATCATG CTACCGGCAA CTGGGAGCGT GCCATTATCG CCTATGAAAC CGCCATTGAG CACACCCAAC ACCTCGCCGA GCAAGAGCAG CAGGCCCTGC AAGCGATGAT TAATGACGCC CTGGACAAGG CCAAACGTCA GGAACTTCCC GATGTTGAGT CAGACGAAAG CCCGACAGAA GTGTAA
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Protein sequence | MQWLADNDAV AKDPLVKRYE FFAQRLTDMA PRAELGFKSR TNRQAPAPKI GRNDPCPCGS GKKFKSCHID QAEQLSFKLG NPTAPIMATA TAMLISKMGL EALDQVPRDH LSDLVASEMA SAYYRHDDID AALELLEGVM DGDREHEYLL YDYWIARYAE WLVEVDQGKQ AESFLLDEYD HPKGVERHQV AQKLAAFYLD QGDPSNAEIW ADTALEQDAH NPFNHYLKGL THHATGNWER AIIAYETAIE HTQHLAEQEQ QALQAMINDA LDKAKRQELP DVESDESPTE V
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