Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_1407 |
Symbol | |
ID | 5328700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | - |
Start bp | 1370672 |
End bp | 1371832 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640793965 |
Product | glucose-methanol-choline oxidoreductase |
Protein accession | YP_001330621 |
Protein GI | 150403327 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGACA TCATTGTAAT TGGTTCAGGA GTTGGGGGAA GTACAGTATT TAAGGAGTTA AAGGGGGCGT TTCCCGATCA AAAAATACGA CTGCTTGAAA GCGGAAGTAA TCCATCTTAT GTTTCTGAAG GAGAAAATAT TGAAATAATC TATGCGAGTT CATTTGGTGG GACAGGCGTT TATTCTGTTG CAAATGCAGT TCGAATTGAT GTGAAAGAAC TTGGAATTTC AAAAAATGAT TCAATATATG AAGATATTGA AAAAGAGTTA TCGGTTTCAG ACGTTCCTAA TGATTACTTA GGAGAAAATT CAAAAAAACT TCTAGAAATG GGATTTTCAA AAACTCCGAA ATTTATTAAC TTTGAATTAT GTAAAAGCTG CGGGCTCTGT GCACACGAAC CCTGTGATGC CAAATGGATA CCGTGTGATT TTTTAAGGGA ATATAAAGAC GATATAGTAA CCGATACGGT TGTAATGAAA CTTGCAAAGC AGGACGGAGC TTTTTCTATT CTTGCACTTG ATAAAAAAAG CGGTGAACTT AAAATTTACA AATCAAAACA AGTGATTGTA TCTGCTGGAG CCATAAATTC ACCCAGAATT TTAAAAACCA TAGTAAATAA TGAAGAAATT GGTAAAAATT TATATCTTGA TACTTTTGTG ACTGTCGGAG GAATTTTAAA AGATTCAAAA CTAAAATCAG AAGTTTCAAT GGCAGTTAAT AAAAAATACG ACGAGTTTTT AGTTGCAACC CATTATTCAG ACTTACTACA CAAAAGAATT TCAGAAGTTG AAGAGGTAAA TAAAAACGAT ATATTCAGCC TCATGGTAAA AATTAAAGAC GAAAATACCG GAGAAGTACT TGAATATAGT GTAAAAAAAG AAATGTCAAT GAAAGATACG AGGACTTTGT GTGAAGGCGT TTCTAAAGCT TCAAAATATC TCTATAATCT AGGTATTGAA AATATATATT CAACAGTTCC AAGAGGATCG CACTCTGGAG GAACGTGTGC AGTTGGAAAA GTTGTTGATG AAAACTTAGA AACCGAAATT GAAGGATTAT ATGTGTGTGA TGCATCAGTA ATTCCAAAAG CACCGGGTGC TCCACCAATT TTAGGAATTA TGGCAATTTC AAAGAAATTT GTCGAAAACT TAAAAAAATA G
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Protein sequence | MEDIIVIGSG VGGSTVFKEL KGAFPDQKIR LLESGSNPSY VSEGENIEII YASSFGGTGV YSVANAVRID VKELGISKND SIYEDIEKEL SVSDVPNDYL GENSKKLLEM GFSKTPKFIN FELCKSCGLC AHEPCDAKWI PCDFLREYKD DIVTDTVVMK LAKQDGAFSI LALDKKSGEL KIYKSKQVIV SAGAINSPRI LKTIVNNEEI GKNLYLDTFV TVGGILKDSK LKSEVSMAVN KKYDEFLVAT HYSDLLHKRI SEVEEVNKND IFSLMVKIKD ENTGEVLEYS VKKEMSMKDT RTLCEGVSKA SKYLYNLGIE NIYSTVPRGS HSGGTCAVGK VVDENLETEI EGLYVCDASV IPKAPGAPPI LGIMAISKKF VENLKK
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