Gene MmarC7_1407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_1407 
Symbol 
ID5328700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp1370672 
End bp1371832 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content34% 
IMG OID640793965 
Productglucose-methanol-choline oxidoreductase 
Protein accessionYP_001330621 
Protein GI150403327 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2303] Choline dehydrogenase and related flavoproteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGACA TCATTGTAAT TGGTTCAGGA GTTGGGGGAA GTACAGTATT TAAGGAGTTA 
AAGGGGGCGT TTCCCGATCA AAAAATACGA CTGCTTGAAA GCGGAAGTAA TCCATCTTAT
GTTTCTGAAG GAGAAAATAT TGAAATAATC TATGCGAGTT CATTTGGTGG GACAGGCGTT
TATTCTGTTG CAAATGCAGT TCGAATTGAT GTGAAAGAAC TTGGAATTTC AAAAAATGAT
TCAATATATG AAGATATTGA AAAAGAGTTA TCGGTTTCAG ACGTTCCTAA TGATTACTTA
GGAGAAAATT CAAAAAAACT TCTAGAAATG GGATTTTCAA AAACTCCGAA ATTTATTAAC
TTTGAATTAT GTAAAAGCTG CGGGCTCTGT GCACACGAAC CCTGTGATGC CAAATGGATA
CCGTGTGATT TTTTAAGGGA ATATAAAGAC GATATAGTAA CCGATACGGT TGTAATGAAA
CTTGCAAAGC AGGACGGAGC TTTTTCTATT CTTGCACTTG ATAAAAAAAG CGGTGAACTT
AAAATTTACA AATCAAAACA AGTGATTGTA TCTGCTGGAG CCATAAATTC ACCCAGAATT
TTAAAAACCA TAGTAAATAA TGAAGAAATT GGTAAAAATT TATATCTTGA TACTTTTGTG
ACTGTCGGAG GAATTTTAAA AGATTCAAAA CTAAAATCAG AAGTTTCAAT GGCAGTTAAT
AAAAAATACG ACGAGTTTTT AGTTGCAACC CATTATTCAG ACTTACTACA CAAAAGAATT
TCAGAAGTTG AAGAGGTAAA TAAAAACGAT ATATTCAGCC TCATGGTAAA AATTAAAGAC
GAAAATACCG GAGAAGTACT TGAATATAGT GTAAAAAAAG AAATGTCAAT GAAAGATACG
AGGACTTTGT GTGAAGGCGT TTCTAAAGCT TCAAAATATC TCTATAATCT AGGTATTGAA
AATATATATT CAACAGTTCC AAGAGGATCG CACTCTGGAG GAACGTGTGC AGTTGGAAAA
GTTGTTGATG AAAACTTAGA AACCGAAATT GAAGGATTAT ATGTGTGTGA TGCATCAGTA
ATTCCAAAAG CACCGGGTGC TCCACCAATT TTAGGAATTA TGGCAATTTC AAAGAAATTT
GTCGAAAACT TAAAAAAATA G
 
Protein sequence
MEDIIVIGSG VGGSTVFKEL KGAFPDQKIR LLESGSNPSY VSEGENIEII YASSFGGTGV 
YSVANAVRID VKELGISKND SIYEDIEKEL SVSDVPNDYL GENSKKLLEM GFSKTPKFIN
FELCKSCGLC AHEPCDAKWI PCDFLREYKD DIVTDTVVMK LAKQDGAFSI LALDKKSGEL
KIYKSKQVIV SAGAINSPRI LKTIVNNEEI GKNLYLDTFV TVGGILKDSK LKSEVSMAVN
KKYDEFLVAT HYSDLLHKRI SEVEEVNKND IFSLMVKIKD ENTGEVLEYS VKKEMSMKDT
RTLCEGVSKA SKYLYNLGIE NIYSTVPRGS HSGGTCAVGK VVDENLETEI EGLYVCDASV
IPKAPGAPPI LGIMAISKKF VENLKK