Gene MmarC7_1352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_1352 
Symbol 
ID5329244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp1311709 
End bp1313010 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content27% 
IMG OID640793908 
Producthypothetical protein 
Protein accessionYP_001330566 
Protein GI150403272 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.491685 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000471163 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAAAAC AGGATTTTTT AGCATATGTT TCAATTTTAC TTTTTTTGGA AGGATATTTA 
TTTGTAAACA TACTTCCGAC ATTGTTTGGG GTTGCCATTT TATCATATCT TTTGATTTTA
AAGCTTTCTT TTAATCCAGA TTTTGAAATT GAGATGCAAA CCTCCAGTTT AGAATTTGTC
GAAAACGAAA CTTTTGAAAT AATATTAAAA ATTAAAAATA ATTCCAGATA TCCATTAACT
TTTAAAATTA AACCAAATAA TGATAATTTT TCGTGGAAAT TTAATAGCAA TATCATTTCA
CCCAATGATA CTGGAAAAAT TTCCATATTT TTAAAAGCTA ACTCAAAAGG AAGCTTTTTA
ATCGAAAATA TATCACTAAT AGTTTCTGAC GTATTTGAAA TTTTCGAAAA AACTTTTGAT
GTTGGAAATT CACTAAATAT CAACGTTTAT CCATCAAATG AAAGTATTGT TAAAGGAATC
AGAACAAATA GAAATACAAA ACTCGGTAAA GAAGCACTTT CAGCAAGTAA AACCGGGCAG
AGAACATCTG AATTTGATCA TCTGCGAGAT TATAATATAG GCGACCAATT TAAACATATC
GATTGGAAAT CTTCATTAAA ATCAGGGCGC TTAATTTCAA AAGAATTTTT AAAAGAAATT
GAAGGAGAAA TTAATGTTCT AGTCGATGTC AGTAGCAATT TTTTAAAGGA TTTTAGTGGG
GGTGCATTAA AGACTGATTA TGTCAGTATT TTAACATTTC AAATTATCTT TTACATCATA
AAAAATCATA ACTCAGTAAA CATTTTGTTT TTTGATGATT CGGGGCTTGT TGATATTAAA
AATAACATTA AAACTAAAGA ATCATTGAAA AAATGTATTA AAGATAAATT AATCCCTAAA
AAAGGAACCC CCCCTACATC CAATTTAAAT GGGAGATTTT TTGAAAAATC TGCGTTTTTT
GAATTATTAA AACCTTTTTT AAAAAATTCT CCGGAAAAAT GTTTGTCGCT CGTAAATCTT
ATAAATTCAA AGAGTACTGC AATTATCATA ACGGATATTT CAAGATATAA GGAACTTATA
ATTCTAAATA ATAAACTTAA TAAAAAAAAT TCAAAATTAT ACGTAGTTTC TCCAAATCCA
TTTTTATTTG GGCTTGATAA AATAACTGAA GAAGAAATTC CTAAGATTTA TCAAAAGTAC
GTACAGAGGG AAAAAAATAT ATTAAAATTA AATAAAATAT GTCCTACCGT AGATGTTAGT
CCAAACGACC TAGCAGATCA GATAATTGGT GAATTTAAAT GA
 
Protein sequence
MEKQDFLAYV SILLFLEGYL FVNILPTLFG VAILSYLLIL KLSFNPDFEI EMQTSSLEFV 
ENETFEIILK IKNNSRYPLT FKIKPNNDNF SWKFNSNIIS PNDTGKISIF LKANSKGSFL
IENISLIVSD VFEIFEKTFD VGNSLNINVY PSNESIVKGI RTNRNTKLGK EALSASKTGQ
RTSEFDHLRD YNIGDQFKHI DWKSSLKSGR LISKEFLKEI EGEINVLVDV SSNFLKDFSG
GALKTDYVSI LTFQIIFYII KNHNSVNILF FDDSGLVDIK NNIKTKESLK KCIKDKLIPK
KGTPPTSNLN GRFFEKSAFF ELLKPFLKNS PEKCLSLVNL INSKSTAIII TDISRYKELI
ILNNKLNKKN SKLYVVSPNP FLFGLDKITE EEIPKIYQKY VQREKNILKL NKICPTVDVS
PNDLADQIIG EFK