Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_1146 |
Symbol | |
ID | 5329606 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | - |
Start bp | 1114839 |
End bp | 1116245 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640793701 |
Product | hypothetical protein |
Protein accession | YP_001330363 |
Protein GI | 150403069 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGTAA TTGTAGTAGG TGGCGGAACT TCGGGACTTC TTTCAGCACT TGCACTTGAA AAAGAAGGGC ATAATGTAAT CGTATTTGAA AAAGAAGATG TTGTAGGCGG TTTATGTAGG AGTGAAAAAA TTGACGGATA TACTGTTGAT ATTGGAGTCC ACGCAATTAC CATGCTCGAT AACGGACCTT TAATCAGACT TTTGAATAAG TACTCGCGAT ACATTCCAAA TTTCAGAAAT TATGGGGATT ACTACATAAG AACTGATAAA TTACACAGAA TCCCTGTTTC GATGCATGAA TGGATGACTA CACCAGTAAT TCCAAATAAA GACAAAGTTT TGATCACTTC AAAGATTATG GACTTAATGA CGATGGGTTT TACAAAAGAT GCTTCTGTAC ATGATTTTGT AAAAGAAATG GGCCTTAGTC AAACGTCAAT AGACTTTTTC AACACTATTG CTTATTTTTT AAGTGGAGAA GACCTTGAAC ACACACCACT CTGGAGATTT TTTACCGGTG CAGGCTATAT TCCTGAAGAC GATATTTTAC CATTCATCTA CAAGGATATG AAAATAAATC CGCTGAAATC AACACTTGTA AAGAAATTTG GAACTGAAAG AATCATCAAT ATCTTAAATG CCGGATTTAT AAGCTCCATA AAAAACGGTT CAAAAAAATA CATCAATAAA TTCATGACTG AGCACAGATA TTCAACACAA GGCTATCCTG TTGGTGGAGT TCAGTCTATC TGTAATTGTG TAACTTATTC ACTTACAAAT ACCCAAATAA AAAACGAAGA AGTCAAAAAA ATAACAAAAA ACGGTAAAAA ATACACTGTA AAGACTTCTG AAGGAGAATA CACGTCAGAT ATTATTGTTT ATTCTGCACC TGCAATTACG TTACCAAAAG TGGCGAAAAT AACTAAAATT CAAAAGAATA AGGAAAAATT AAGCAACATC AAGTTTACAA AATCAACTAC TGTCTGGATC GGGGACGAAA AAAATTACTT CCCATATTTG GGTTCTGAAA TCTGGATAGA GAATCCTTGC TGGGCGTCTA CCATTTCAAA CTACGATGAG AGCCTAGCTC CAAAAGGAAA ACACTTAATG GGCTTTTCTT TCGTAAATTC AAAGAGAGAA GATGCTTTGC AAACTATTGA AAATAAACTA AATTTAAATA CCGATAAAGT CGATATGCTC TATGTTCAAG AAACGGTTCC AGAGCAGGCA TCTTGCTCAA TTGGACAGTT CTTCGTTTAC CCGAAAATTG ATGATAGTTT CTTTGTTGTT GGAACAGATT CTGATCCCCG AAGTATGGGC ATAACAAGAG CCGCATATTC TGTTGAAGTC ATGTTATCTG AATTTAAAAA TATCTACGAT ACTCAGAACG AATCAGCTAA AAAATAA
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Protein sequence | MDVIVVGGGT SGLLSALALE KEGHNVIVFE KEDVVGGLCR SEKIDGYTVD IGVHAITMLD NGPLIRLLNK YSRYIPNFRN YGDYYIRTDK LHRIPVSMHE WMTTPVIPNK DKVLITSKIM DLMTMGFTKD ASVHDFVKEM GLSQTSIDFF NTIAYFLSGE DLEHTPLWRF FTGAGYIPED DILPFIYKDM KINPLKSTLV KKFGTERIIN ILNAGFISSI KNGSKKYINK FMTEHRYSTQ GYPVGGVQSI CNCVTYSLTN TQIKNEEVKK ITKNGKKYTV KTSEGEYTSD IIVYSAPAIT LPKVAKITKI QKNKEKLSNI KFTKSTTVWI GDEKNYFPYL GSEIWIENPC WASTISNYDE SLAPKGKHLM GFSFVNSKRE DALQTIENKL NLNTDKVDML YVQETVPEQA SCSIGQFFVY PKIDDSFFVV GTDSDPRSMG ITRAAYSVEV MLSEFKNIYD TQNESAKK
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