Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_0633 |
Symbol | |
ID | 5738900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | + |
Start bp | 582895 |
End bp | 584547 |
Gene Length | 1653 bp |
Protein Length | 550 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 641283099 |
Product | dihydroxy-acid dehydratase |
Protein accession | YP_001548682 |
Protein GI | 159905020 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.435026 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAGTG ATAACGTCAA AAAAGGAGTT ATAAGATCTC CAAACCGAGC TCTTTTAAAG GCTTGTGGAT ATTCAGACGA AGACATGGAA AAACCATTTA TTGGGGTTGT AAACAGCTTT ACAGAAGTTG TTCCAGGCCA CATTCACTTA AAAACATTAT CAGATGTAGT TAAACATGGT GTTTATGCAA ATGGAGGAAC ACCATTTGAA TTTAATACAA TCGGAATTTG TGACGGTATT GCAATGGGCC ACGAAGGTAT GAAGTACTCA TTACCTTCAA GAGAAATCAT TGCAGATGCT GTTGAATCAA TGGCAAGGGC ACATGGTTTT GATGGTCTTG TTTTAATTCC GACATGTGAT AAGATCGTTC CTGGAATGAT AATGGGTGCT TTAAGATTAA ATATCCCATT TATTGTAGTT ACTGGGGGAC CAATGCTTCC CGGAGAATTC CAAGGTAAAA AATACGAACT TATCAGCCTC TTTGAAGGGG TTGGTGAATA CCAGGTTGGA AAAATTACTG AAGAAGAATT AAGGTGTATC GAAGACTGTG CATGTCCGGG TGCGGGAAGC TGTGCAGGGC TTTACACTGC AAATAGTATG GCATGCCTTA CAGAAGCTTT AGGGCTCTCT CTTCCAATGT GTGCAACAAC TCATGCAATT GATGCTCAGA AGGTTAGGCT TGCCAAAAAA AGTGGCTCAA AAATTGTTAA TATGGTAAAA GAAGACTTAA AACCAACAGA TATATTAACA AAAGAAGCTT TTGAAAATGC TATTTTAGTT GACCTCGCAC TTGGTGGATC GACAAATACA ACACTACACA TTCCTGCAAT TGCAAATGAA ATTGAAAATA AATTCATAAC TCTCGATGAT TTTGATAGAT TAAGCGATGA AGTTCCACAC ATTGCATCAA TCAAACCCGG TGGAAACCAC TACATGATTG ACCTACACAA TGCTGGAGGC ATTCCTGCGG TATTCAATGT TTTAAAAGAA AAAATCAGAA ATACAAAAAC TGTTGATGGA AGAAGTACTT TGGAAATTGC AGAATCTGTT AAATACATAA ATTACAATGT TATCAGAAAA GTTGAAGCTC CAGTTCATGA AACTGCTGGT TTAAGAGTTT TAAAGGGAAA TCTTGCTCCA AATGGTTGCG TTGTAAAAAT TGGTGCAGTG AACCCAAAAA TGCACAAACA TGAAGGGCCT GCAAAAGTTT ACAATTCTGA AGATGAGGCA ATTTCTGCAA TACTTGGCGG AGAAATTGTA AAAGGCGACG TTGTAGTAAT CAGATACGAA GGACCATCAG GAGGACCTGG AATGAGAGAA ATGCTCTCCC CAACTTCAGC AATCTGTGGA ATGGGTCTTG ATGACAGCGT TGCATTGATT ACTGACGGAA GATTCAGTGG TGGAAGTAGA GGTCCATGTA TCGGACACGT TTCTCCAGAA GCTGCTGCTG GCGGAGTAAT TGCTGCAATT GAAAACGGAG ATATTATTAA AATTGATATG ATTGGAAAAG AAATAAATGT TGATTTGGAT GAATCGGTAA TTAAAGAAAG ACTTTCAAAA CTGGGAGAAT TTGAGCCTAA AATCAAAAAA GGCTATTTAT CAAGATATTC ACGACTCGTT TCTTCAGCTG ATGAAGGGGC AGTTTTAAAA TAA
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Protein sequence | MISDNVKKGV IRSPNRALLK ACGYSDEDME KPFIGVVNSF TEVVPGHIHL KTLSDVVKHG VYANGGTPFE FNTIGICDGI AMGHEGMKYS LPSREIIADA VESMARAHGF DGLVLIPTCD KIVPGMIMGA LRLNIPFIVV TGGPMLPGEF QGKKYELISL FEGVGEYQVG KITEEELRCI EDCACPGAGS CAGLYTANSM ACLTEALGLS LPMCATTHAI DAQKVRLAKK SGSKIVNMVK EDLKPTDILT KEAFENAILV DLALGGSTNT TLHIPAIANE IENKFITLDD FDRLSDEVPH IASIKPGGNH YMIDLHNAGG IPAVFNVLKE KIRNTKTVDG RSTLEIAESV KYINYNVIRK VEAPVHETAG LRVLKGNLAP NGCVVKIGAV NPKMHKHEGP AKVYNSEDEA ISAILGGEIV KGDVVVIRYE GPSGGPGMRE MLSPTSAICG MGLDDSVALI TDGRFSGGSR GPCIGHVSPE AAAGGVIAAI ENGDIIKIDM IGKEINVDLD ESVIKERLSK LGEFEPKIKK GYLSRYSRLV SSADEGAVLK
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