| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1506 |
|---|
| Symbol | |
|---|
| ID | 4927840 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | - |
|---|
| Start bp | 1448895 |
|---|
| End bp | 1450022 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640167002 |
|---|
| Product | peptidase M50 |
|---|
| Protein accession | YP_001098017 |
|---|
| Protein GI | 134046532 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTTA CGTCAACAGC AATACTGTTG GTTTTTTTAA TATTTTGGAC AGTTTTGTAC
CTGATAAACC TTAATAAAGA TAAATTAAGG ATTAATTTGG ATTTAAAAAC ATACATGGGA
ATTTTTGGCA TTTTAAGGAC GCAACTTGGA ATGAATACGA TAAAAAAACT TGGAAAATAC
AAGATATGGC AGAAACTTGC ATATATTTCA ATTCCAGTAT GTGTTGCAAT AAGTATTTAC
ACATTTTACG CATTTATTCT CTCCACTGTC GGGCTTTTTG GCGGAACCGT TGAAAAAGAA
GCCGCTAAAC CGATTATATT TTTATTTGGA AACACGATTC CGTGGATTCC AGGAATTATG
GCAATTATCA TTGGAGTTAC AATTCACGAA CTCTCACACG GGATTGTCGC AGCATCATTT
GGGCAGAAAA TAAAAAGTTC TGGACTTTTA ATGGCTTTAG GAATTCCTAT GGGCGCATTT
GTGGAACTTG GGGATGAATT CAAAGATTCA AAACCAAAAA TCCGGGGTGC AATTGCAGCA
GCAGGCCCAA TTTCAAATGT ACTTGTATTT TTCCTCGTAC TTTTTGCAAT GCCTTATTTT
ACAGGAATGA ATTCAAAATT AACGATAACT GAAGTTTTAG AAGACAATCC TGCCTATGGA
ATAATTTTTG AAGGCGATGT AATTTATTCA ATAAACGGAA AAACTGTTAA CTCTTTAAAT
GATTTTTACG ATGCAGTAAG TGACATACAA CCTGAACAAA GTGTTGAATT AGTCGTTTTA
AGAAATAACG AGGTAAATTC GTATTATATA ACGACATCTG AAGAAGGAAA AATGGGAATC
GTTTCAGAAC CTTCAAAAAC AGTATTATAT ATCTTACAAA CTCTTTACTG GACGTCTTTA
TTAAATATGC TCTTAGGATT TTTCAATTTA CTTCCAGCAG CCCCTCTTGA TGGATATCAC
ATATGGATGG CGTTGCCTGA TGCGATAAGG GACTTTAAAA AGAATAACAG GTTAGTTTCA
AAACTTGCAA ATCTGGTTGG ATGGATAATC AGTGAAAGAA ATTTAAACTC GATAAGTATA
TTTGTATGGC TGGTGATACT AGCTTCAATG ATATACTCAT TCCTTTAA
|
|---|
| Protein sequence | MELTSTAILL VFLIFWTVLY LINLNKDKLR INLDLKTYMG IFGILRTQLG MNTIKKLGKY
KIWQKLAYIS IPVCVAISIY TFYAFILSTV GLFGGTVEKE AAKPIIFLFG NTIPWIPGIM
AIIIGVTIHE LSHGIVAASF GQKIKSSGLL MALGIPMGAF VELGDEFKDS KPKIRGAIAA
AGPISNVLVF FLVLFAMPYF TGMNSKLTIT EVLEDNPAYG IIFEGDVIYS INGKTVNSLN
DFYDAVSDIQ PEQSVELVVL RNNEVNSYYI TTSEEGKMGI VSEPSKTVLY ILQTLYWTSL
LNMLLGFFNL LPAAPLDGYH IWMALPDAIR DFKKNNRLVS KLANLVGWII SERNLNSISI
FVWLVILASM IYSFL
|
|---|
| |