Gene MmarC5_0703 details

Gene Information

• Locus tag: MmarC5_0703
• ID: 4928787
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus maripaludis C5
• Kingdom: Archaea
• Replicon accession: NC_009135
• Strand: +
• Start bp: 679254
• End bp: 679847
• Gene Length: 594 bp
• Protein Length: 197 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 640166204
• Product: TPR repeat-containing protein
• Protein accession: YP_001097228
• Protein GI: 134045742

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.247899
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGAACA ATTACGGTAT TCAAAAATGG CACAGCCATG GAGCAATGCT CTGTAATTCT 
GAAAAATATT CGGAAGCACT TGAGTGTTAT GATAAAATAC TTTCATATTA TCCAAAAGAT 
TTTTTAGCAG TCTTTGGAAA AGGAATGGTT TTTTTAAAAC TTAAGGAATA CGAAAAAGCA 
TTGTGGTGTT TCAACAGCGT TTTAAACATG AATTCATCAT ATATTCCTGC AATAAAAAAT 
AAAGCAATTG TGGAAGAAAA GTTAAAAAAG CAGGAACGCG AAAATTATAA TAAATTTTCA 
AAATTGGGCG TTGAAAACTA CAAACAGGGA AATTTTGAGA AGGCTCTCGA CTATTTTGAA 
AAAGCTTTTG AAATAAATCC ATATTCAGAA ACTTTAAGAA AAAATATTGA AAAGACACGC 
CTTAAATTAA AAGAAACACT CCCTATCAGA TGGAATAATA AAGGAGTCGA ATATTACAAG 
GTTAAAAACT ACCAAAAGGC GTTCGAATGC TTTGAAAAAG CTGTTAAGTT AAATCCAAAT 
TTTGAATCTG CTTTAAAAAA TAAAGCAATG GTTCAAAAGT TACTTAAAAA TTAA 

 

Protein sequence

MKNNYGIQKW HSHGAMLCNS EKYSEALECY DKILSYYPKD FLAVFGKGMV FLKLKEYEKA 
LWCFNSVLNM NSSYIPAIKN KAIVEEKLKK QERENYNKFS KLGVENYKQG NFEKALDYFE 
KAFEINPYSE TLRKNIEKTR LKLKETLPIR WNNKGVEYYK VKNYQKAFEC FEKAVKLNPN 
FESALKNKAM VQKLLKN