Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_0687 |
Symbol | |
ID | 4928284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | - |
Start bp | 663093 |
End bp | 664637 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640166189 |
Product | seryl-tRNA synthetase |
Protein accession | YP_001097213 |
Protein GI | 134045727 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0172] Seryl-tRNA synthetase |
TIGRFAM ID | [TIGR00415] seryl-tRNA synthetase, Methanococcus jannaschii family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.224098 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGATTTA AACTCGATGG GAGAATAATA TTCAGCAAGG ATGTCGAAGA AGAAACACAA AAAGATATCG TCGAAGTTTT GGAAAACAGA GATATTTTCT TAAAAGGTGT TCCAGAAGGC AAAGAAAACG AAGCTTCAAA AATTGAAACT TACGAATTTG ACGGAAAAGA TTTAAAACTT AAAATGACTT CAGGAACCTA CACGAGAGCG CATGAAGGTA TTGTAAGATT GAAAAAACCA ATAATGGAAA AAGTTGGAAG AAAACACCAG ATTGGTATTA GGGATGTTGC AATTGATAAA TACATTGTAA CACTCACAGC AGAACCTTCA AAAGTTAGCG AATTAAAAGG ATTGAAAGTT CCAGAATGTG AAGTTGAATT AGAAAGTGAA AAAATTAACA TTGTCTTTGA AAATTTAGGC GATGGAGAAT TAAAAAGAAA TATTATTGAC AGGGCGATTA AATTCGTTAA AAATGAACTT GATAAACAAG ATCAAGACTT AACGTTTGAA GTTTGTAAAA TTGCTCCAGG AACAATTGTT TCAGACTACA AAGCAAAAAG AGAAATTACA TTTGATACGG ACCCAACTGA ACTCGCAGAA CCATACGGCT GGGTAAAAAG ATTCCCTGGA AGAGGACAGT GGTTTTATAC TGCACCAATG GCAAAATTAT TCAGAGCATT CGAAAGCATA ATTATCGAAG AATGTATCGA TAAAATAGGA TTTGACGAAT GTTTATTCCC AAAATTAATT CCCTTGGATG TAATGTACAA AATGAGATAT TTAGAGGGAC TTCCTGAAGG AATGTACTAT GTATGCCCTC CAAAAAGGGA ACCTGAAATG TTTCAGGATT TTGTAAACGA AATGATGATT AAAAAGGAAA TTCCTATTGA AAAATTAAAA ACTTTGTTAA GAGATCCTGC ATACGTTTTA GCACCTGCAC AGTGTGAACC GTTCTACACA TTCTTCGATC ATGAATTGGT AGATGTTGAT CACCCTTCGA AATTTTTCGA CAAAAGTGGT TGGACTTACA GGTGGGAAGG CGGTGGAGCC AAAGGTCTTG ACAGAGTAAA TGAGTTCTTG AGGGGCGAAT GTGTATGGAT GGGTACTCCC GAATTTGTGG AAAAAGTGAG AGACGATACC CTAAAATACG CTGAAAAACT AGCAGAAAAA TTAGATTTAG AATACTGGAC TGAAGTTGGA GACGATCCAT TCTATTTAGA AGGTAGAAAA TCAGAAGCTA GAGGAATTGA ATTCCCTGAT GTTCCAAAAT ACGAAATGAG ACTATGGTTA CCACACGTTA AAGAAGAAAG AAAAGGTGTT GCTGTAACTT CAGCAAACAT TCATGGAACA CACTTTGTAG AAGGATTTGG AATTAAAGAC TACAAAGAAA GAAAAGTTTG GACTGGATGT ACAGGATACG GACTAACCAG ATGGGTAATT GGATTTTTAG CACAGTACGG CTACAATTAC GACGATTGGC CAGAATTAAT CCAGAAAAAA GTTGGAAAAT TGCCAGAAAT TCCTAAAGTA ATAACCTGGC CATAA
|
Protein sequence | MRFKLDGRII FSKDVEEETQ KDIVEVLENR DIFLKGVPEG KENEASKIET YEFDGKDLKL KMTSGTYTRA HEGIVRLKKP IMEKVGRKHQ IGIRDVAIDK YIVTLTAEPS KVSELKGLKV PECEVELESE KINIVFENLG DGELKRNIID RAIKFVKNEL DKQDQDLTFE VCKIAPGTIV SDYKAKREIT FDTDPTELAE PYGWVKRFPG RGQWFYTAPM AKLFRAFESI IIEECIDKIG FDECLFPKLI PLDVMYKMRY LEGLPEGMYY VCPPKREPEM FQDFVNEMMI KKEIPIEKLK TLLRDPAYVL APAQCEPFYT FFDHELVDVD HPSKFFDKSG WTYRWEGGGA KGLDRVNEFL RGECVWMGTP EFVEKVRDDT LKYAEKLAEK LDLEYWTEVG DDPFYLEGRK SEARGIEFPD VPKYEMRLWL PHVKEERKGV AVTSANIHGT HFVEGFGIKD YKERKVWTGC TGYGLTRWVI GFLAQYGYNY DDWPELIQKK VGKLPEIPKV ITWP
|
| |