Gene Mmar10_2860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_2860 
Symbol 
ID4286290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp3146242 
End bp3146886 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content65% 
IMG OID638142355 
Productheme exporter protein CcmA 
Protein accessionYP_758079 
Protein GI114571399 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component 
TIGRFAM ID[TIGR01189] heme ABC exporter, ATP-binding protein CcmA 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.584644 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGA AATTCCCCGA CCTGCCCGAT CTGCAGCCCG AGACGCTTCG TGTTTCCGGT 
CTGTCGCTGA GCCGCGGCGA CATCACGCTG GTCCGCGATT TCAGCCTCGA TCTGGCCCCG
GGCCAGGCGA TGCTGATGAG TGGCCCCAAC GGGACTGGCA AGACAACCCT GCTGCGCGCG
GTCGCCGGAT TTGTCCGCCC TGATGCGGGA CGTGTTGTTT TCGGTGAGGG CCCAAAGGCT
GACAGTGCCT CCGAGCTTGT TGCCTGGTTG GGTCATGCGG ATGGCCTCAA ACCTGTCGAG
ACGCCGAGAC AGAGTTTGCG CTTCTGGGCG AAGATGAATG ATCAGGGCCG CGATCCTATC
CTGCCCTTGA TGCGCGCGAT GGCCATTGAG AGCCTGATCG ACCGACCGGC CAGCCGCCTG
TCGCGGGGCC AACAGCGCCG TTGTGCGCTG GTCAGGGTTG CGCTGGCCAA CCGGCCGATC
TGGTTGCTTG ACGAGCCCGC CGGTCCGCTC GATGGCGGTG GACGAGCGCG CCTGGCAGCG
CTTGTGGACT GGCATCGTTC CCGCGGCGGA AGTGTGATCG CAGCGACGCA TCAGTCCCTG
GATTGGCCGG ACGCCAAACG AATCGACCTC GGGGCGCACA GATGA
 
Protein sequence
MTEKFPDLPD LQPETLRVSG LSLSRGDITL VRDFSLDLAP GQAMLMSGPN GTGKTTLLRA 
VAGFVRPDAG RVVFGEGPKA DSASELVAWL GHADGLKPVE TPRQSLRFWA KMNDQGRDPI
LPLMRAMAIE SLIDRPASRL SRGQQRRCAL VRVALANRPI WLLDEPAGPL DGGGRARLAA
LVDWHRSRGG SVIAATHQSL DWPDAKRIDL GAHR