Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmar10_0024 |
Symbol | |
ID | 4284084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Maricaulis maris MCS10 |
Kingdom | Bacteria |
Replicon accession | NC_008347 |
Strand | - |
Start bp | 29256 |
End bp | 30038 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638139484 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_755258 |
Protein GI | 114568578 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTCG ACTCATCCAT TGCCGCCATT GTCACCGGCG GCGCATCCGG CCTCGGCGAA GGTACAGCCC GCCGTCTGGC CGCCGATGGC GCCAAGGTCG CCATTTTCGA CATGAATGCC GAACGCGGCG AGATGGTCGC CAAGGACATT GGCGGCGTGT TCTGCCAGGT CAATGTCTCC GACGAAGCCA GCGTCGACGC CGGCCTGGCC AAGGCGCGCG AGGCCCACGG CCAGGAACGT GTCTTCGTCA ATTGCGCCGG TATCGGCTGG GCAGAAAAGA CGGCGCGTCG GTCCTCCTCG ACCGGCGAGG TCTCGGCCCA TTCGGCCAAG GGCTTCCAGA CCGTGATCGG CGTCAACCTG ATCGGCTCCT TCCTGTGCGC CTCGAAATCG GCGGCCGGCA TGATGACGCT GGACCCGCTC GACGGCTCCG GTCGTGGCGT GATCGTCAAC ACCGCCTCGG TCGCGGCCCA GGACGGTCAG ATCGGCCAGG TGGCCTATGC TGCGTCAAAG GGCGGTATCA CCGGCATGAC CCTGCCGATG GCCCGCGACC TCGCCCGTGA AGGCATTCGC GTCAACACCA TCCTGCCGGG CTTCTTCGAG ACCCCTATCT ACCAGCAGAT GCCGCCAGAG GTGAAAGTCT CGCTGGCCTC GCACCTGCAA TTCCCGCAGC GCTTCGGCAC GCCGGAAGAG TATGCGGACC TTGTCGCCTT CATGGTCACG TCCGACTATA TCAATGCCGA GTGTGTCCGC CTCGATGCGG GCGCCCGCAT GCCGCCTAAA TAA
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Protein sequence | MKLDSSIAAI VTGGASGLGE GTARRLAADG AKVAIFDMNA ERGEMVAKDI GGVFCQVNVS DEASVDAGLA KAREAHGQER VFVNCAGIGW AEKTARRSSS TGEVSAHSAK GFQTVIGVNL IGSFLCASKS AAGMMTLDPL DGSGRGVIVN TASVAAQDGQ IGQVAYAASK GGITGMTLPM ARDLAREGIR VNTILPGFFE TPIYQQMPPE VKVSLASHLQ FPQRFGTPEE YADLVAFMVT SDYINAECVR LDAGARMPPK
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