Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlab_1675 |
Symbol | |
ID | 4795731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanocorpusculum labreanum Z |
Kingdom | Archaea |
Replicon accession | NC_008942 |
Strand | + |
Start bp | 1708361 |
End bp | 1709206 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640100365 |
Product | tRNA pseudouridine synthase ACD |
Protein accession | YP_001031103 |
Protein GI | 124486487 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0101] Pseudouridylate synthase |
TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.352236 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000000344781 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAAACTCG CGTTCCTTGC AGGATACCGG GGACAGAACT TCGCCGGCTC CCAGTACCAG CCGCATAAAC GGACCGTTGA GGGAGAATTC GTGGCCGGCG GTATCGAACT CGGGCTTTTT TCCGATGCAA AGGAGGCGCA TTTTCGAACC GCAGGACGGA CCGACAAAGG TGTGAGTGCG AGAAGACAGC TTTTTTCGAT CACGACCGAG AAGCCAGAAC TCGCAATTGA GGCGCTGAAC TTTCATCTGC CGGACGATAT CTGGTGTATC GGTGCCGCCG AGGTCGACGA AGAGTTCTAT CCAAGATACG CCGCACGGGA ACGAAGCTAC CGGTATTATT TTCCGTATCC GGCGGATGTT TCCCGAATGC AGGATGCGGC GTCCCGTCTG ATCGGAACGC ACAACTTCAG CGGGTTTGCA AAAATGGAGG CGGGAAGGGA TCCCGTCCGG ACCGTGACCC GCGCCGAGGT TTTTGAAGGA AAGGACGGCT GCCCGGTCTT CGAGGTCGCC GCGAAAAGTT TTCTCTGGAA CATGGTCAGA GGGATGGCAG GTGCTTTGCA GACGATCGGC CTCGGCCTAT GCGAACCGGA CGTCATCGAA GAACTTCTGA GTTCCCCAAC GGCCCGGGTT CATCCGGCGC CGGCAGAAGG GCTCGTCTTC TGGGACGTGG TCTGCGATCT TTCTTTTACC CCGATGCGGC AGAAACGCGA AGTAAAGCGA TCGCTTGCGA AAGAAGCGGC CGCGGCACGT GCCGATATGC ATACCGCCGA GGCACTTTTG GAAGACGATC CGGAAGAGTT CTGGAAGAAA AAAGTGATCC GCGGATACTC GGCATTGATG AAATAG
|
Protein sequence | MKLAFLAGYR GQNFAGSQYQ PHKRTVEGEF VAGGIELGLF SDAKEAHFRT AGRTDKGVSA RRQLFSITTE KPELAIEALN FHLPDDIWCI GAAEVDEEFY PRYAARERSY RYYFPYPADV SRMQDAASRL IGTHNFSGFA KMEAGRDPVR TVTRAEVFEG KDGCPVFEVA AKSFLWNMVR GMAGALQTIG LGLCEPDVIE ELLSSPTARV HPAPAEGLVF WDVVCDLSFT PMRQKREVKR SLAKEAAAAR ADMHTAEALL EDDPEEFWKK KVIRGYSALM K
|
| |