Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlab_1651 |
Symbol | |
ID | 4794826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanocorpusculum labreanum Z |
Kingdom | Archaea |
Replicon accession | NC_008942 |
Strand | - |
Start bp | 1679265 |
End bp | 1680107 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640100336 |
Product | shikimate kinase |
Protein accession | YP_001031079 |
Protein GI | 124486463 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG1685] Archaeal shikimate kinase |
TIGRFAM ID | [TIGR01920] shikimate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.00233159 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATCGGTA AAGGCATGTC CTACGGTGCT TTGTCGGTGA TCAATGCGGT ATCTACCGGA AAAGGGGCAG CATTCGGCAT AGACCTCAAA ACCGAGGCGA CCGTTCAGCT CATTTCAGAA CCTGAGTTCA CAGTTGAGAT CGACGGCCAC CCGACCGAGT CCGTTTCCCT CGCTCGTTTT TCCGTCGAGG AAGTACTTCA GCGGTATCCC AACGCGGGAA TGAACGGTGC GGTGATCCGG ACCACCTCGA ATATTCCCAT ATCCCAGGGC CTGAAAAGCA GCAGTTCCGC TGCGAACGCT ATTATTTCGG CCACTGCCGC GGCCCTTGGG GTTACGATCG ATCCGCTCGA GATCGGCCGG ATCGGCGCGA CGGCCGCTAT CAGGGCCGGC GTCAGTATAA CCGGGGCATT TGATGATGCC TGCGCCTGTC AGCTCGGCGG TCTTGTCTTT ACCGACAATT CTAACCGCGA ACTTCTGCTC CGCCGCCCGA TGCCTGAAGG TTACACGGCT GTAATCCACA TCCCGCCGTT CCAGATTCGG AAAACCACAT TTCCGAGTGA AAAGATGCGT GAAATGCGTG AAATGGTCGC GGCAGCTTAC GATCTGGCGG TCGAAGGAGA TGTTTTTTCA GCGATGTACG TGAATGGAAG ATGTACCTGT GAGGCGATCG GCATCACGCC GGAGACGGCC GATAGAGCCC TCTCATGCGG AGCCGCTGCG GCCGGACTTT CCGGGACGGG TCCCGCCACC GGGATCCTTG TGCCGGATGA AGGCCTTGAC GAATTTCTCG ATCGGTTCGG TCGGGAGAAT GTTCTCCTCG CGAACATCAG GAACGGTGTG TAA
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Protein sequence | MIGKGMSYGA LSVINAVSTG KGAAFGIDLK TEATVQLISE PEFTVEIDGH PTESVSLARF SVEEVLQRYP NAGMNGAVIR TTSNIPISQG LKSSSSAANA IISATAAALG VTIDPLEIGR IGATAAIRAG VSITGAFDDA CACQLGGLVF TDNSNRELLL RRPMPEGYTA VIHIPPFQIR KTTFPSEKMR EMREMVAAAY DLAVEGDVFS AMYVNGRCTC EAIGITPETA DRALSCGAAA AGLSGTGPAT GILVPDEGLD EFLDRFGREN VLLANIRNGV
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