Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlab_1375 |
Symbol | |
ID | 4795054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanocorpusculum labreanum Z |
Kingdom | Archaea |
Replicon accession | NC_008942 |
Strand | + |
Start bp | 1397022 |
End bp | 1400738 |
Gene Length | 3717 bp |
Protein Length | 1238 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640100059 |
Product | MoxR-like ATPases-like |
Protein accession | YP_001030808 |
Protein GI | 124486192 |
COG category | [S] Function unknown |
COG ID | [COG1520] FOG: WD40-like repeat |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00027114 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0024969 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTGTATGA AAAAAATGCG TGAATTTCTC TATTTGTTGT TTATCATCGT CCTGATGATA TGTACTATTG GCGTTGCATC TGCAGATGAA CCAACAGGGC CAACGTCAGA TAATGTCAGG ATGCATATCT CTGTTGATGG AGGCATCGAC AGTACATCTG CTGTACATGA CAACAGATTG TTTATTGCAA ACTGGAAAAG TATGGACTTC TCCACCACAA ATGCGATGGG AGTTTTCTGT TTTGATTTAA CCAATGGAGA CCTGATATGG TTCCGGTCCA TCGGGGAAGT GTTGTCCGAA ATAACGGTTG CAGATGGACA AGTCTTTGCT GGTACAAAAT CAGGAGCATT GTTTTGTCTT GATGAAGATA CAGGAAATAC TGTGTGGAGT GTGACCGGCA TTACAGCCGG ATATTGGGGT CTGACAGGGG CCCCTCTCGT GAATGATGGT GTGGTCTATG TTACGAGCCC TACGAAGCAC CAGCTTATGG GATATGACAC CAGAAATGGC AATCTTGTTT TTCAACGCGG GCTTGGGTCA AGCGGGGGAA TTATCTTTAC CTCACCAACA CTTTCATCCT CAAACAATCT GCTTGTGATG GATGATACCG GAATTCTTGA AATATCTCCG GCAAACGATC TGGTTAATTC CTACACACTC CCATCAGCCA TTACAACCGG CAGTTCGATC GTGGCACACG GGAACGCAGT TTATCTTAAT GCAAACGGCA TTCTGTACCG AATAAACACG ATCGGAGAAT GGACCGAGGC ATGGAATGTC TCCACGCTCA CTTCGACCAC ACCTGTCGTA ACCGACTCGG CCGTATATGT TTCCCAGGGA GGGACCCTGG CAGCATATGA TATTACTTCA GGAGAGGCAC TTGATGGATT TACTACGCAT GTAAGCGGAG GATCCAGCAG CTATCTCAAT CCAGTGCTTG CGGGAAATAC AATTTATTAT GCAATGAATG CACATTGCGG AAAAGTTTTT GCAATAAATG CAACAACAGG GGCAGAAGAA TGGAACTTCA GTCTTCCGGA GAGCGGAAAT CCTGGAGAAG ACTACACATT CTTTGCATCC TCTCCAGTAG TGTACGGTGA AAATCTGTTC ATCGGTTCAG AAGGAGCTGG ATTTTATGTC ATTGGAGAGG GGGATCTTAT CGAAATCGAC AAAACAAATG CCGCTGATCA GCCATATGTT CCCCCCGCCC CAATGACAGT GCTCTACGAG GGAACAGTAC GTCTGGTGAA TACCTCGGAA GGAGTGACGG TTAAAGATGC GCTCGATGCG GCAGTGTCGG CAGGAGGGTT CACCTATAAT CTCACCGAAT ATGATACGAT AAAAGACATC AATGGAATAG AAAATGCAGA GGACTGGTCG CATTCGTGGA TGACCACATA CTACAACAAT AACGAAATAC CGGTTTACAG CGTGCTTGAC CCGGTAGTCG CCGGAGCCAC CATTTCACTT CATTATGATG AGCTTGATGC ATCGTGGAAT GTTGTAGGAA CCCAGTATCT CGTGAATGTA ACCGTAGGGA ATATCAATGA ACCAGCACCG TGGACAGTCA TCTACGATGA CACGATCGAT CTCACAAACA CATCCACGGG AGTGACGGTA AAGGATGCGC TCGATGCAGC AGTTTCGGCA GGAGGGTTCA CCTATAACCT CACCGAATAT GATACGATAA AAGACATCAA TGGAATAGAA AATGCAGAGG ACTGGTCGCA TTCGTGGATG ACCACATACT ACAACAATAA TGACACCTCG GTCTACAGCG TGCTTGACCC GGTAGTCGCC GGAGCCACCA TTTCACTCCA TTATGATGAG CTCGACGCAT CGTGGAATGT TGTCGGAACC CAGTATCTCG TGAATGTAAC CGTAGGGAAT ATCGATGAAC CAGCACCGTG GACGATCATC TACGATGACA CGGTCAATCT GACGAATTCT TCAACGGGAG TGACGGTAAA GGATGCACTC GATGCGGCAG TGTCGGCAGG AGGGTTCACC TATAACCTCA CCGAATATGA TACGATAAAA GACATCAATG GAATAGAAAA TGCAGAGGAT TGGTCGCATT CGTGGATGAC CACATATTAC AACAATAACG AAATACCGGT CTACAGCGTT CTTGACCCGG TAGTCGCGGG AGCAACTATT TCACTCCATT ATGATGAGTT CGATGCATCG TGGAATGTGA TAGGAACGGA ATATATGGTC AATGTTACGG TAAACAGCAT TTCAGACCTC AGCATCACAA ATCCATCAAC GATGGTCACG GGAGCATCTG CTGTCTTTAC TGCCCTCTCC AATTACCCGG GAAATACCAC ATATTCGTGG GACTTTGGCG ACAATACCAC CGTTGTTGAA ACAAAATCCT CAGGCGTTGC CTCTACTGTT GATAAAATCT ATACAAATGC CGGGACTAAA ATCATCACCG TAACTGCGGA ATATGATAAT CGATCAGTAA CAAACAGCGC TGAAATAATT GTAACAACAC CGCCATCAGC ATTCGACGAA TCCAACAACC TCGAAGCAAA ACTTACCGGG GACTCAATCC CGGACACAAC CCATATCTTC TTTACTGGGA CAGATGTTAC TAACGCATCA AATGTTACGA TAAGCATCTC CAGATATCAG AATCAAAGTT CAATTTCCGA TGATGAGTGG CAGAATATTC AGACAAACTA CACCCTACCA AACTCAAACG AAAAACCTCT CTTCATCTTA GAGATAGACT CGTCAAATGC ATATGGGGTA AACAACATCC ATCAGCTTAA CAACTACGCC CGCCTTTCCA TTCGTCTTGC CATTGATTAC GCCAATGCAT CGAACGTGAG TTTCTATCGA TATGTTGACG GCTCGAACGG TTATGAGCAG CTGCATTACA CGATTGGAAA TGTGGCTCCG GGATGGGTGG AATTCCTTGT AGACATCCCG GGATTCTCAA CAATCCTTGC AGCAATAGAT GAGATCCCGG CAGATTCCAG AACAACACCG GTTTCATCAA CGGGACCTGT GGCAAATCTC GCAACTATCA AGTATAAAAC CATATATTAC GGCACTATCA CCGTTGATCC GGGATCATTC ACCTACACAA CCACAATGGA CGATAAAACA TTCATCGTAA ACAACCTGAG TGTTTTCGGG ATACTGCATG CATCAGGAAT GAATCTCCAG ACAAAAGAGT GGCCAGGCGG AATCTATGTT CATTCCATCA ATGGAATCGC TCAGGATGAA AATCTCAACG GGTGGCTGTA TCAGGTAAAC GGTCTGACAA CAAGCCAGAT GTCAAATAAC TACATGGTCC ATGACGGAGA TAAAATCGTC TGGTATTATA GTGAGAGTAT GGCGTCAATA CCGGAGACAA GTCAGTATGC CTACGGATTC ATCGTAAAGG TCAAAGCATC CGCGGTGCCG CTGCTTAATC TTTCAGCGGC AGAAACGCCG ACAATCAATC TTGGAATGCC TGAGGGCGTC ACCATCAGCA GTGGGATCCC GCAGAGAATC ACGGTCGACA CCTCAATCAC ACAGGCAGGT GGGTTTGTCA ACATTACCGA ACACACAATA ATAATTACCG AACCCGGTCT TCAGATGACC ATCCCAGTAA AGAATCTCAT CAGGAGTGAT GAGATAGTCA CGGCTGAAAT CCAGAACATG ACTGCAGAAC TTGTACCTGC TGCAGGCAAA ATCAAAACAT CCGGAATAGA GGTGTAA
|
Protein sequence | MCMKKMREFL YLLFIIVLMI CTIGVASADE PTGPTSDNVR MHISVDGGID STSAVHDNRL FIANWKSMDF STTNAMGVFC FDLTNGDLIW FRSIGEVLSE ITVADGQVFA GTKSGALFCL DEDTGNTVWS VTGITAGYWG LTGAPLVNDG VVYVTSPTKH QLMGYDTRNG NLVFQRGLGS SGGIIFTSPT LSSSNNLLVM DDTGILEISP ANDLVNSYTL PSAITTGSSI VAHGNAVYLN ANGILYRINT IGEWTEAWNV STLTSTTPVV TDSAVYVSQG GTLAAYDITS GEALDGFTTH VSGGSSSYLN PVLAGNTIYY AMNAHCGKVF AINATTGAEE WNFSLPESGN PGEDYTFFAS SPVVYGENLF IGSEGAGFYV IGEGDLIEID KTNAADQPYV PPAPMTVLYE GTVRLVNTSE GVTVKDALDA AVSAGGFTYN LTEYDTIKDI NGIENAEDWS HSWMTTYYNN NEIPVYSVLD PVVAGATISL HYDELDASWN VVGTQYLVNV TVGNINEPAP WTVIYDDTID LTNTSTGVTV KDALDAAVSA GGFTYNLTEY DTIKDINGIE NAEDWSHSWM TTYYNNNDTS VYSVLDPVVA GATISLHYDE LDASWNVVGT QYLVNVTVGN IDEPAPWTII YDDTVNLTNS STGVTVKDAL DAAVSAGGFT YNLTEYDTIK DINGIENAED WSHSWMTTYY NNNEIPVYSV LDPVVAGATI SLHYDEFDAS WNVIGTEYMV NVTVNSISDL SITNPSTMVT GASAVFTALS NYPGNTTYSW DFGDNTTVVE TKSSGVASTV DKIYTNAGTK IITVTAEYDN RSVTNSAEII VTTPPSAFDE SNNLEAKLTG DSIPDTTHIF FTGTDVTNAS NVTISISRYQ NQSSISDDEW QNIQTNYTLP NSNEKPLFIL EIDSSNAYGV NNIHQLNNYA RLSIRLAIDY ANASNVSFYR YVDGSNGYEQ LHYTIGNVAP GWVEFLVDIP GFSTILAAID EIPADSRTTP VSSTGPVANL ATIKYKTIYY GTITVDPGSF TYTTTMDDKT FIVNNLSVFG ILHASGMNLQ TKEWPGGIYV HSINGIAQDE NLNGWLYQVN GLTTSQMSNN YMVHDGDKIV WYYSESMASI PETSQYAYGF IVKVKASAVP LLNLSAAETP TINLGMPEGV TISSGIPQRI TVDTSITQAG GFVNITEHTI IITEPGLQMT IPVKNLIRSD EIVTAEIQNM TAELVPAAGK IKTSGIEV
|
| |