Gene Mlab_1335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1335 
Symbol 
ID4796036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1362871 
End bp1363644 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content57% 
IMG OID640100017 
Producthypothetical protein 
Protein accessionYP_001030769 
Protein GI124486153 
COG category[S] Function unknown 
COG ID[COG1478] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01916] F420-0:gamma-glutamyl ligase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.438797 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0345268 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCCCC ACATGTCGGG TTTCTTTTCC GTTTACGGGA TTTCCACAGG ACTGCTCGTA 
TCCGGCGACG ATATAATTGA CCGGGTCATC AGTTCTCTGA AAGACACCGA GGCTAAATCA
ATAGAAAACG GCGACATTCT GCTTTTTGCC GAGTCGCCGC TCTCCACCAC CGAAGGCCGC
AATATCAGGC TGGACGACAT AACACCGTCT GCCGAGGCAT ACCGGCTTTC GGAGAAGTAT
CATCTCGACG CCCGGCTTGC CGAGGTCGTC ATCCAGGAAA GCGATACGAT CGTCGGCGGT
GTCCCGGGAT ACCTCCTTGC CGGAAAATGG GACCTTATCC TCCCGAACGC CGGCGTGGAC
GAGTCGAACG CCCCGGACGG GTGGGTCACC CGCCTCCCGG CAGATCCGGA AGCAAGCGCC
AAACGACTGC GTGACGAGAT CAGGGAACGC ACCGGAAAAG ATACCGCGGT CATCATCATC
GATTCACGGA CCCATTCGAT GCGCCTTGGG GTATCGGGGG TCGCCATCGG CTGCTCCGGG
ATCCAGCCGA TTTCGGACGA GCGGGGAAAA CCAGACCTTT ACGGAAACAA ACTGCAGGTC
ACAAGAAGGG CGATCGCCGA CTCTCTCGCC TCGACCGCCG AACTTCTGAT GGGAGAGGCC
TCCGAGGGGG TCCCGGTCGT TCTTGTACGC GGATACCCGT ACATCAGATG CGAAAACTGC
AGAATAGAAA CGATACCCGC CGAAGAGGAT CTCTTCCTCA ATCTCGGCAA ATAA
 
Protein sequence
MYPHMSGFFS VYGISTGLLV SGDDIIDRVI SSLKDTEAKS IENGDILLFA ESPLSTTEGR 
NIRLDDITPS AEAYRLSEKY HLDARLAEVV IQESDTIVGG VPGYLLAGKW DLILPNAGVD
ESNAPDGWVT RLPADPEASA KRLRDEIRER TGKDTAVIII DSRTHSMRLG VSGVAIGCSG
IQPISDERGK PDLYGNKLQV TRRAIADSLA STAELLMGEA SEGVPVVLVR GYPYIRCENC
RIETIPAEED LFLNLGK