Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_5132 |
Symbol | |
ID | 4880830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | + |
Start bp | 5375449 |
End bp | 5376315 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640142442 |
Product | HhH-GPD family protein |
Protein accession | YP_001073387 |
Protein GI | 126437696 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1194] A/G-specific DNA glycosylase |
TIGRFAM ID | [TIGR01084] A/G-specific adenine glycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGATC CGGCCGACGT TCTGGCGTGG TACGACCGCG AGCAGCGGGA TCTGCCATGG CGCAGACCCG GTGTGACGCC GTGGCAGATC CTGGTCAGCG AGTTCATGTT GCAGCAGACT CCGGTGGCCC GCGTCGAACC GATCTGGCTG AGCTGGATCG AGCGCTGGCC GACTCCGTCG GCGACCGCGG CGGCCGGCGT CGCCGACGTG TTGCGGGCGT GGGGCAAGCT CGGATACCCG CGCCGCGCGA AGCGTCTCCA TGAGTGCGCG ACGGTGATCG CGATCGAACA CGGCGATGAG GTGCCCTCGG ACGTCGAGGT GTTGCTGACG CTCCCGGGCA TCGGCGCATA CACCGCCAGA GCCGTGGCTT GCTTCGCCTA CGGGCAGCGG GTCCCGGTGG TCGACACCAA CGTGCGCCGG GTCATCGCCC GGGCGGTGCA CGGCCGCGCC GACAGCCCGC CGAGCAGCCG CGACCTCGAC GATGTCGCGA CCCTGCTCCC GGAAGGCCCT GAGGCGCCAC GGTTCTCGGT CGCGGTGATG GAACTGGGCG CGACGGTGTG CACCGCGCGC ACTCCGCGCT GCGGCCTGTG CCCGCTGGGC ACCTGCACCT GGCGTTCGCT CGGATATCCG GCCGCGTCCG CACCCGCACG CAAGGTGCAG CGCTACGCGG GCACCGACCG CCAGGTGAGG GGCCGGCTGC TCGATGTGCT GCGCGGCAGC AGCTCGCCGG TGTCGCGCGA CCAACTCGAC GTCGTGTGGT TGACCGACCC GGCACAGCGC GATCGTGCGC TGGATTCGCT GCTGATCGAC GGGCTGGTCG AGCAGACCGC CGACGGCCGC TTCGCGCTCG CGGGAGAGGG TTCGTGA
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Protein sequence | MIDPADVLAW YDREQRDLPW RRPGVTPWQI LVSEFMLQQT PVARVEPIWL SWIERWPTPS ATAAAGVADV LRAWGKLGYP RRAKRLHECA TVIAIEHGDE VPSDVEVLLT LPGIGAYTAR AVACFAYGQR VPVVDTNVRR VIARAVHGRA DSPPSSRDLD DVATLLPEGP EAPRFSVAVM ELGATVCTAR TPRCGLCPLG TCTWRSLGYP AASAPARKVQ RYAGTDRQVR GRLLDVLRGS SSPVSRDQLD VVWLTDPAQR DRALDSLLID GLVEQTADGR FALAGEGS
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