Gene Mjls_2291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_2291 
Symbol 
ID4878011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp2389620 
End bp2390876 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content72% 
IMG OID640139592 
Productpolyprenyl synthetase 
Protein accessionYP_001070568 
Protein GI126434877 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGACG GCCAAGTGCG GTTCGGACGC ACAGTCGCCG GGTTCGCGAC TGTAGGGATC 
TACAACGTTG CCGCCGCGGG CGGACGCGCG GTGTGCCGGC AGGCGAGCAT CACCCCATAC
ACTCGCGGCG CCACCCCATC AGGAAGTGAG GATGTCGTGC CCGACATCGA CCAGACGGAG
TTCCTGTCCG ACCTCGAGGA GCACCTGCAC GCGGTCGTCC GCGACACCGT CGCCGAACCG
CTGCGGTCGA TCGACGAGAA CCTGGGGACC GTCGCGGCGC TCTGCCAGTC CGCGGTGCAG
TCCGGCGGCA AACGCCTGCG CCCCCGGTTC GCCTACTGGG CGTGGCGGGT GGGCGCACCG
GCGGACGCCG CGCCGCAACC CCTGATCCGC CTGGCCGCCG CCCTGGAACT GCTGCACGCG
GCGATCCTGG TCCACGACGA CGTGATCGAC GCCTCCGAGG TGCGGCGTGG GCAGCCGTCG
GTGCGCGCGG CGCTGACCGC CGGCCACCGC CGCGACGCCG GATGGGGTGA CGCCACGGAC
TTCGGCGACA ACATGGCCCT GCTGGTCGGG GATCTGTTGT GGTCGGCCGC CCACGACACG
TTCGACGATG CGGTGGCGGG CCTTCCGGCC GGCATCGCCC AGCGCACGTC GCGCGCGTTC
CGGACCATGC GGGTGGAGGT GCTGGCCGGC CAACTGTTGG AGCTGCGGGC CCAGGCCGGG
CGCGACTATC ACGCCGACAC GGCGGAGAAG ATCCTGCGCT ACAAGACCAG CGCGTACACC
GTCGAACGGC CCGTCGAACT CGGCCTGGAA CTGGCCGGAT CCGCGTCGCC GGCCACGGCG
CAGACACTGC GCGACTACGC CGGCGCCGTC GGGCAGGCGT TCCAGCTGCG CGACGACCTC
GCCGACCTGT TCGGCACCAC GAAGACCAGC GGCAAACGGA CCGGTGACGA CATCCGGGCG
GGTAAACCCA CCGAGTTACT CGGCGCCGCT TACGAGTTGG CGGACGACCT GGACCGCAGC
CTGTTGGCCA CCATCGTCGG CGACGCTACG GCCGACCAGG CGGCGATCGC GGAAGTGCAG
ACGGTCGTGC TGCAGTGCGG GGCCGCTGAC CGCGTCGGAC GGCGCATCGC CGATCTGGTC
GCCACCGCCC GGCGGGCGAT CGCCGACCTG TCGGCTTCGG CGGACCCGAC CGCGCTGGCC
GGGCTCTCGG ACATGCTCGC CGAGTGCACC GAGCTGTCGT TCCTGCCGGC GGAGTAG
 
Protein sequence
MSDGQVRFGR TVAGFATVGI YNVAAAGGRA VCRQASITPY TRGATPSGSE DVVPDIDQTE 
FLSDLEEHLH AVVRDTVAEP LRSIDENLGT VAALCQSAVQ SGGKRLRPRF AYWAWRVGAP
ADAAPQPLIR LAAALELLHA AILVHDDVID ASEVRRGQPS VRAALTAGHR RDAGWGDATD
FGDNMALLVG DLLWSAAHDT FDDAVAGLPA GIAQRTSRAF RTMRVEVLAG QLLELRAQAG
RDYHADTAEK ILRYKTSAYT VERPVELGLE LAGSASPATA QTLRDYAGAV GQAFQLRDDL
ADLFGTTKTS GKRTGDDIRA GKPTELLGAA YELADDLDRS LLATIVGDAT ADQAAIAEVQ
TVVLQCGAAD RVGRRIADLV ATARRAIADL SASADPTALA GLSDMLAECT ELSFLPAE