| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_1458 |
|---|
| Symbol | |
|---|
| ID | 4877193 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 1558751 |
|---|
| End bp | 1562026 |
|---|
| Gene Length | 3276 bp |
|---|
| Protein Length | 1091 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640138765 |
|---|
| Product | UvrD/REP helicase |
|---|
| Protein accession | YP_001069750 |
|---|
| Protein GI | 126434059 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.901245 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCGC GGTACAGTCC CGCCGAATTG GCCTCGGCGC TGGGCCTTTT CGCCCCCACC
GACGAACAGG CGGCGGTCAT CGCCGCGCCG CCGGGCCCGG TCGTCGTGAT CGCCGGGGCG
GGTGCGGGCA AAACCGAGAC CATGGCCGCT CGGGTGGTGT GGCTGGTCGC CAACGGCTAT
GCCACACCGG GGCAGGTGCT CGGGCTGACC TTCACCCGTA AGGCGGCCGG TCAGTTGTTG
CGCCGGGTAC GCACCCGGCT GGCGCGGTTG TCCGGTGCCG GGTTGGTGCC CGGCATCGGC
CCGGGACTCG GAGCCACCGA CGACCCGCCG ACGGTCAGCA CCTACCACGC GTTCGCCGGC
ATGCTGCTGC GCGACCACGG TCTGCTGCTG CCGATCGAGC CGGAGACCCG GTTGCTCGGT
GAGACCGAAC TGTGGCAGTT GGCCCATCGC GTGGTGTGCG AACATCCCGG CCCGCTCGAG
ATCGACAAGA CGCCGGCGGC GGTCACCGAC ATGGTGCTGC GCCTCGCCGG CCAACTCGCC
GAGCATCTGG TCGACACCGA CGAGTTGCGC GACACCCACG TCGAGCTCGA GCGGCTGGTG
CACACCCTGC CCGCCGGGCC CTATCAGCGT GACCGCGGGC CGAGCCAGTG GCTGCTGCGG
ATGCTGGCGA CACAGACCGA GCGCACCGAG CTCATCCCGT TGGTCGACGC CCTGCACCGG
CGGATGCAGT CCGAGAAGGT GATGGACTTC GGGATGCAGA TGGCCGCCGC CGCCCGGCTC
GCCGCCGCCC ACCCGCAGGT CGGCGCCGAG CTGCGGGCCC GCTACCGCGT GGTGTTGCTC
GACGAGTACC AGGACACCGG ACACGCCCAG CGGGTGGCGC TGTCGGCGCT GTTCGGGGGC
GGTGTGGACG ACGGTCTGGC GTTGACCGCG GTCGGCGACC CGATCCAGTC GATCTACGGC
TGGCGCGGTG CGTCGGCGAC CAACCTGCCC CGCTTCGCCA CCGACTTCCC CCTCTCCGAC
TGCACTCCCG CCCGCGTCCT GGAGCTGCGC ACCAGTTGGC GCAATCCGCC GAGCACACTG
CATCTGGCCA ACGCGGTGTC CGCTGAAGCG CGGCAGCGTT CGGTGGCGGT GCGGTCGCTG
CGGCCGCGGC CGGGCGCGGA GCCCGGCACC ATCCGGCTCG CACTGCTCGA CAACGTTGCC
GCAGAACGTG ACTGGTTGGC CGACGAGGTG GCCCGTCGCT ACGACGCCGC CCGTGCCGAG
GACGAGGCCC CGCCCACGGC GGCGGTGCTG CTGCGCCGCA ACGCGGACGC GGCACCGATG
GCCGAGGCGC TCACAGCGCG GGGTGTGCCC GTGGAGGTGG TGGGTTTGGC CGGTCTGCTC
GGGGTCGCCG AGGTCGCCGA CGTGGTGGCG ATGTTGCGTC TGGTGGCCGA TCCCACCGCG
GGTGCGGCGG CGATGCGCAC CGTGACCGGT CCGCGGTGGC GACTCGGCGG ACGCGACATC
GCGGCGCTGT GGCGGCGGGC TGTCGAACTC GACGACGGTG GACCGGGTCC GGAGGCGACG
GCGGCAGAGA TCGTCGCCCG GGCCGCACCG GACGCCGATG CGGCCTGTCT GGCCGACGCG
ATCTGTGATC CGGGTCCCGC CGAGCGGTAC TCACCGGAGG GCTACCGCCG CATCGTCGCG
CTCGGACGCG AATTGACCTC GCTGCGTGGG CACCTCGGCA TCGCGCTACC CGACCTCGTC
ACCGAGGTGC GCCGGGTGCT CGGCGTCGAC GTCGAGGCCC GCGCAGCCAT GCCGGTGCCT
GCGGGTTGGT CGGGGACCGA ACACCTCGAC GCCTTCGTCG ACGTCGTCGC CGACTACGCG
GGCCGGCCCG GCGCCACGAT CAGCGGGCTG CTCGCCTATC TCGACGCGGC GATGGAGCGC
GAGAACGGTC TGGCGCCCGC GGATCTCGCC GTCTCCACCG AGCGGGTGCA GATCCTGACG
GTGCACGCCG CCAAGGGGTT GGAATGGCAG GTGGTGGCGG TGCCGCATCT GAGCGGACGG
ATCTTCCCGT CGACCGCGCA GGCCCGCACG TGGCTGACCG ATCCGGCGGA TCTGCCCCCG
CTGCTGCGCG GCGACCGGGC GACCACCACC GACCATGGCG TGCCGGTGCT CGACACCTCC
GACGTCAACG ATCGAAAGAT CCTGTCGGAC AGGATCAACG ACCACAAACG CCACCTCGAG
CAGCGTCGCG TCGACGAGGA GCGGCGGCTG CTGTACGTCG CGCTCACCCG CGCCGAGGAC
ACACTGCTGC TCTCCGGACA CCACTGGGGT GCGACGGAGG CGAAACCGCG GGGCCCGTCG
GAGTTCCTGG AGGAGCTCAA GGACATCATC GACCGCGCTG AGCAGGCCGG GCAGCCCTGC
GGAGTGGTCG ACCAGTGGGC GCCGGCGCCG GCCGAGGGTG AGAAGAACCC GTTGCGCGAC
AACGTCAAAG AGGTGCTCTG GCCCGCCGAC CCGGCCGGCG GCCGACGCGC CGCGGTCGAC
CGCGGCGCGC AGTTGGTGGC CCGGGCTATG GCCGGTGCGG TGGAGACGGT TCAGGATGTC
GACGGCTGGG CGGCCGACGT GGACGCGCTG CTCGCCGAAC GTGAACGGGC CGCGCAGAAG
CCACCGCTGA CACTGCCGGC CGAGGTCTCG GTGAGCACGC TGGTGAACCT CAGCAACGAC
CCGGACGCGG TGCTGTCCCG ACTCAACCGC CGGGTGCCCA CCCGACCCGA CCCGAATGCC
TCGCTGGGCA CGGCTTTTCA CGACTGGGTG CAGCGCTACT TCGGGGCCGA GCGGTTGTTC
GACCTCGACG ATCTGCCCGG GGCCGTCGAC AGCGACTTCA GGCGCACCGA AGCCGAACAG
CTCACCGAAC TGCAGACGTC GTTCATGTTG TCCCCGTGGG CCGCCCGCAC ACCGATCGAC
GTCGAGGTGC CGTTCGACAT GGTTATCGGG GAGACGATGG TGCGGGGCCG CATCGACGCG
GTGTTCGCCG ATGACGACGG CGGCGCCACC ATCGTCGACT GGAAGACCGG GGCGGCGCCG
GACACACCCT CGGCCGCTGA GCACGCCGCG ATCCAGCTCG CCGTCTACCG GCTGGCGTGG
GCGCAACTGA GCGGATGCCC GGTGGAGCGG GTGCGGGCGG CGTTCCACTA CGTCCGCCCG
AACCAGACGC TTCGCCCGGC CGGCCTACCG GATGTGGAGG ATCTCGCGGC GCTGCTGGCG
GCGGCGCGGG AACCGGCGGG TCAGGAGGTG CGGTAG
|
|---|
| Protein sequence | MTARYSPAEL ASALGLFAPT DEQAAVIAAP PGPVVVIAGA GAGKTETMAA RVVWLVANGY
ATPGQVLGLT FTRKAAGQLL RRVRTRLARL SGAGLVPGIG PGLGATDDPP TVSTYHAFAG
MLLRDHGLLL PIEPETRLLG ETELWQLAHR VVCEHPGPLE IDKTPAAVTD MVLRLAGQLA
EHLVDTDELR DTHVELERLV HTLPAGPYQR DRGPSQWLLR MLATQTERTE LIPLVDALHR
RMQSEKVMDF GMQMAAAARL AAAHPQVGAE LRARYRVVLL DEYQDTGHAQ RVALSALFGG
GVDDGLALTA VGDPIQSIYG WRGASATNLP RFATDFPLSD CTPARVLELR TSWRNPPSTL
HLANAVSAEA RQRSVAVRSL RPRPGAEPGT IRLALLDNVA AERDWLADEV ARRYDAARAE
DEAPPTAAVL LRRNADAAPM AEALTARGVP VEVVGLAGLL GVAEVADVVA MLRLVADPTA
GAAAMRTVTG PRWRLGGRDI AALWRRAVEL DDGGPGPEAT AAEIVARAAP DADAACLADA
ICDPGPAERY SPEGYRRIVA LGRELTSLRG HLGIALPDLV TEVRRVLGVD VEARAAMPVP
AGWSGTEHLD AFVDVVADYA GRPGATISGL LAYLDAAMER ENGLAPADLA VSTERVQILT
VHAAKGLEWQ VVAVPHLSGR IFPSTAQART WLTDPADLPP LLRGDRATTT DHGVPVLDTS
DVNDRKILSD RINDHKRHLE QRRVDEERRL LYVALTRAED TLLLSGHHWG ATEAKPRGPS
EFLEELKDII DRAEQAGQPC GVVDQWAPAP AEGEKNPLRD NVKEVLWPAD PAGGRRAAVD
RGAQLVARAM AGAVETVQDV DGWAADVDAL LAERERAAQK PPLTLPAEVS VSTLVNLSND
PDAVLSRLNR RVPTRPDPNA SLGTAFHDWV QRYFGAERLF DLDDLPGAVD SDFRRTEAEQ
LTELQTSFML SPWAARTPID VEVPFDMVIG ETMVRGRIDA VFADDDGGAT IVDWKTGAAP
DTPSAAEHAA IQLAVYRLAW AQLSGCPVER VRAAFHYVRP NQTLRPAGLP DVEDLAALLA
AAREPAGQEV R
|
|---|
| |