| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1990 |
|---|
| Symbol | |
|---|
| ID | 3924304 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 2246898 |
|---|
| End bp | 2247698 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637897599 |
|---|
| Product | formylmethanofuran dehydrogenase |
|---|
| Protein accession | YP_503419 |
|---|
| Protein GI | 88603241 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2218] Formylmethanofuran dehydrogenase subunit C |
|---|
| TIGRFAM ID | [TIGR03122] formylmethanofuran dehydrogenase subunit C |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.114316 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.184502 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACCA TAACAATGAC TCTTGTACAG GAGCCTGAAT TATTCCTTGA ATGCTATAGT
GTCACTCCGG ACTTATTTGC AGGAAAAAGC CTTGCAGAGA TTGCAGATCT TCCGGCACAT
GAAGGAAAGA TTCAGTGGAA ACTTGGAGAT TTTTTTAAAT TTGAAGGAAA GGCCGGTGAA
ACCGCTGCTG ATACGAAGAT CGTGGTAAAC GGAAATGTGC GCCGGATGAA GCGATTTGGA
CAGCAGATGA CTGCAGGTGA GATCATCATT AACAGCGATG CTGATATGTA TATCGGTGGC
TGGATGAAAG GCGGTAAGAT CACTGTGAAA GGTAATGCAG ACAGTTTTCT TGGTATCGCC
ATGGAAGGTG GAGAGATCCT GATTGAAGGC GATGCACAGA ACCATGTTGG CAGTGCTTAT
CGTGGAGACT GGCGTGGTAT GAGTGGTGGG CTTATCAGGG TAAAAGGAAA AGCTGGAAAT
GATATTGGCA CTGCCATGAC CGGCGGGACC ATCATCATCG AAGGTGATGC ATTCATCCAT
GTCCTCACCC ATGCAGAAGG AGGCACCGTC ATCATCAAGG GTGATGTCGA GGGTCGTGTC
GGTGGCCAGA TGGTTAAGGG AGATGCATAC ATCCTTGGTA ATCTGCTTTA CCCACTTCCT
GGTTTTAAGA AAGTTGCAAC CGTTGAAAAA GAAGTCGATG GCGCAACCTA TACCTTTGAT
CAATTCATCG GAGACCTTGG TGAGCGAAAG GAAAAGAAGA AAGGTGAAAT TATTTACGGG
AATATTTTCC TTAAAAAATA A
|
|---|
| Protein sequence | METITMTLVQ EPELFLECYS VTPDLFAGKS LAEIADLPAH EGKIQWKLGD FFKFEGKAGE
TAADTKIVVN GNVRRMKRFG QQMTAGEIII NSDADMYIGG WMKGGKITVK GNADSFLGIA
MEGGEILIEG DAQNHVGSAY RGDWRGMSGG LIRVKGKAGN DIGTAMTGGT IIIEGDAFIH
VLTHAEGGTV IIKGDVEGRV GGQMVKGDAY ILGNLLYPLP GFKKVATVEK EVDGATYTFD
QFIGDLGERK EKKKGEIIYG NIFLKK
|
|---|
| |