Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mflv_2180 |
Symbol | |
ID | 4973502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium gilvum PYR-GCK |
Kingdom | Bacteria |
Replicon accession | NC_009338 |
Strand | + |
Start bp | 2257862 |
End bp | 2258926 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640456389 |
Product | succinyl-diaminopimelate desuccinylase |
Protein accession | YP_001133446 |
Protein GI | 145222768 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | [TIGR01900] succinyl-diaminopimelate desuccinylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.136819 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.30884 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCTGGATC TACACGCCGA CCCGATCGCG CTCACCGCGG CGCTGGTGGA CATCCCCAGC GAGTCGCGGC ACGAGGCCCG CATCGCCGAT GCGATCGAGG CGGCGCTGCG CGAGCAGACC ACCGGTTTCG AGGTCGTCCG CAACGGCGAT GCGGTGCTGG CGCGCACCCA CTTCGGCCGG CCGTCGCGGG TGCTGCTCGC CGGGCACACC GACACGGTCC CGGCGGCCGA CAACCTGCCG AGCCGACTGG CAGACGGGAT CCTGCACGGC TGCGGCACCT CGGACATGAA GTCCGGGGAC GCGGTGTTCC TGCACCTGGC GGCCACCGTC GTCGACCCCG CGCACGACAT CACCCTGGTC ATGTACGACT GCGAGGAGAT CGAGGCATCG GCCAACGGGC TCGGACGGAT CGAACGGGAG CTGCCCGAGT GGCTCGCCGC CGACGTCGCG ATCCTGGGCG AACCCTCGGG TGGATACATC GAAGCCGGCT GCCAGGGCAC GCTGCGCGTG GTGGTGCGCG CGACGGGAAC ACGCGCACAC TCGGCGCGAT CGTGGTTGGG CGACAACGCC GTTCACAAAC TCGGCGACGT ACTGGCCCGG CTCACCGCCT ATCGCGCACG CAGCGTCGAC ATCGACGGCT GCACCTACCG CGAGGGACTC TCGGCCGTGC GCATCGACGG AGGCGTGGCA GGCAACGTGA TCCCGGATGC GGCAAGTGTC ACCGTGAACT TCCGGTTCGC GCCGGACCGG ACGATCGAGC AGGCCCACGC GCACGTGCTG GAGGTGTTCG ACGGCCTCGA TGTCGAGATC GAGCTCACCG ACTCCGCCGC CGGCGCGCTG CCGGGACTGA GCAGGCCCGC CGCGGCCGCG CTCGTCGAGG CGGCCGGCGG GCAGGTGCGT GCGAAGTACG GCTGGACCGA CGTGTCGAGG TTTGCGGCCC TGGGCATTCC GGCCGTGAAC TACGGCCCCG GCGACCCGAA CCTCGCGCAC CGCGTGGACG AACACGTCGA GGTCGCACAG ATCACCGCGG TGACCGACAT GCTGAGGCGC TATTTAATCG GTTGA
|
Protein sequence | MLDLHADPIA LTAALVDIPS ESRHEARIAD AIEAALREQT TGFEVVRNGD AVLARTHFGR PSRVLLAGHT DTVPAADNLP SRLADGILHG CGTSDMKSGD AVFLHLAATV VDPAHDITLV MYDCEEIEAS ANGLGRIERE LPEWLAADVA ILGEPSGGYI EAGCQGTLRV VVRATGTRAH SARSWLGDNA VHKLGDVLAR LTAYRARSVD IDGCTYREGL SAVRIDGGVA GNVIPDAASV TVNFRFAPDR TIEQAHAHVL EVFDGLDVEI ELTDSAAGAL PGLSRPAAAA LVEAAGGQVR AKYGWTDVSR FAALGIPAVN YGPGDPNLAH RVDEHVEVAQ ITAVTDMLRR YLIG
|
| |