| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_1905 |
|---|
| Symbol | |
|---|
| ID | 4973229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | + |
|---|
| Start bp | 1983323 |
|---|
| End bp | 1984126 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640456114 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001133173 |
|---|
| Protein GI | 145222495 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.958829 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.189609 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGGC GGGTTGAGGG CAAGCGGGTC CTGATCACCG GCGCAGCCCG AGGTATGGGG
CGCAGTCACG CCGTGCGGCT GGCGCAAGAG GGTGCCGATC TGATCTTGGT CGACATCTGT
GAGTCCTTGC CGGAGGTGGA ATATCCGCTT GCCGCAGTCG AAGAGCTCGC GGATACCGCG
GAGTTGGTGG CCCAGCACGG GCGCCGGGCA GTCACCCATG TCGTGGACGT ACGGGACGAG
CAGGCGCTCT CGGCGGCCGT CGACGACGGC GTCGCGAGGC TCGGCGGTCT CGACGCCGCG
GTGGCCAATG CCGGCGTACT GACCGGTGGC ACATGGGACA CCACCACGGC GCAGCAGTGG
CGCACCGTGA TCGACGTCAA CCTCATCGGT ACCTGGAACA CGTGCCGCGC CGCGATTCCC
CACCTGCTCG AGCGCGGCGG CAGTCTGATC AACGTGAGCT CGGCCGCCGG TATCAAGGGT
TCACCTCTGC ACACGCCGTA CACCGCATCC AAAGCCGGCG TCGTCGGTAT GAGCAAGGCG
CTCGCCAATG AGCTTGCCGC CATGAACATC CGGGTCAACA CCGTGCATCC GACCGGAGTG
CCGACAGGTA TGCGGCCGGC GTCGCTGCAT CAACTGCTGC ACGACACCCG CAGCGACCTC
TCGCCGATCT TCCAGAACGC ACTACCGATT GTCATGGCCG AGGCCGTCGA TATCAGCAAT
GCGGTCCTGT TCCTGATCTC GGACGAGGCG CGCCACGTCA CGGGTTTGGA GTTCAAGGTC
GACGCCGGAG TGACGATCCG TTGA
|
|---|
| Protein sequence | MSGRVEGKRV LITGAARGMG RSHAVRLAQE GADLILVDIC ESLPEVEYPL AAVEELADTA
ELVAQHGRRA VTHVVDVRDE QALSAAVDDG VARLGGLDAA VANAGVLTGG TWDTTTAQQW
RTVIDVNLIG TWNTCRAAIP HLLERGGSLI NVSSAAGIKG SPLHTPYTAS KAGVVGMSKA
LANELAAMNI RVNTVHPTGV PTGMRPASLH QLLHDTRSDL SPIFQNALPI VMAEAVDISN
AVLFLISDEA RHVTGLEFKV DAGVTIR
|
|---|
| |