Gene Mflv_1188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_1188 
Symbol 
ID4972514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp1246197 
End bp1247393 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content70% 
IMG OID640455384 
Productcysteine desulfurase family protein 
Protein accessionYP_001132458 
Protein GI145221780 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0520] Selenocysteine lyase 
TIGRFAM ID[TIGR01976] cysteine desulfurase family protein, VC1184 subfamily 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.191261 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTTG ACGTCGCCCG GGTGCGTGGG TTGCATCCGT CGTTGGGCGA CGGCTGGGTC 
CACATGGACG CCCAGAACGG CATGCTTCTT CCCGATTCCG TCGGGCGGGC GGTCTCGACG
GCGTTCCGCG GCTCGATGCC GACGACCTCC AGTGCCCATC CCGCCGCCAG GCGCAGCGCC
GCGGTGCTGG CTGCCGCCCG GCAGGCCGTG GCCGATCTGG TCAACGCCGA TCCGGCGGGT
GTGGTGCTCG GCGCCGACCG TGCGGTGCTG TTGACCTCGC TGGCCGACGC GGCCTCGGGT
CGGGTGGGGC TCGGCTACGA GGTCGTCGTG ACGCGCCTCG ACGACGAGGC CAACATCGCG
CCGTGGCTGC GCGCGGCCGA CCTGTTCGGC GCCCAGGTGA AGTGGGCCGA GGTCGACATC
GAGACCGGCG AGCTGCCCAC CTGGCAGTGG GAGAGCCTGG TCAGCCGCCC CACCCGCATC
GTCGCAATCG CTTCTGCCTC AGCAACTCTG GGCGCGGTCA CCGAGCTGCG CGAGGTCACC
AAGCTGGTGC ACGAGGTCAA CGGTCTGGTG ATCGTCGACC ATTCGGCGGC CGCGCCGTAC
CGCCTCATCG ACATCAACGA AATCGACGCC GACGTCGTCG CGGTGAACGC GCTCGCATGG
GGCGGGCCCC CGATCGGGGC GCTGGTCTTC CGCGACCCGT CGCTGATCAG CGCGTTCGGT
TCGGTCTCGC TGGATCCCAC GGCGACGGGT GCGGCCCGTC TCGAGCTCGG TGCGCACCAG
TTCGGCATGC TCGCCGGCGT TGTGGCGAGC ATCGAATACC TTGCCACGCT CGATGATTCG
GCACAGGGGT CGCGGCGCGA GCGGTTGGCG GTGTCGATGC GGTCGGCCTC GGCGTACCTG
AGCGCGCTGT TCGACTACCT GCTGACATCG TTGCGCTCGC TTCCGACGCT GACGGTGATC
GGCAGCCCCG AGGTCCGCAT CCCGGTGCTC ACCTTCGCCA TCGACAACGT GTCGGCCGAG
CGCGTCGTGC AGAGGCTGGC CGACAACGGC ATCCTGGCCA TCGCCAACGC GAACTCCCGC
GTCCTCGACG TGATCGGCGT CAACGACGTC GGCGGAGCGG TCACCATCGG GCTCGCGCAC
TACAGCACCG CCGCCGAGGT CGATCAGCTG GTGCGCGCAC TCGCCTCGCT CGGCTGA
 
Protein sequence
MAFDVARVRG LHPSLGDGWV HMDAQNGMLL PDSVGRAVST AFRGSMPTTS SAHPAARRSA 
AVLAAARQAV ADLVNADPAG VVLGADRAVL LTSLADAASG RVGLGYEVVV TRLDDEANIA
PWLRAADLFG AQVKWAEVDI ETGELPTWQW ESLVSRPTRI VAIASASATL GAVTELREVT
KLVHEVNGLV IVDHSAAAPY RLIDINEIDA DVVAVNALAW GGPPIGALVF RDPSLISAFG
SVSLDPTATG AARLELGAHQ FGMLAGVVAS IEYLATLDDS AQGSRRERLA VSMRSASAYL
SALFDYLLTS LRSLPTLTVI GSPEVRIPVL TFAIDNVSAE RVVQRLADNG ILAIANANSR
VLDVIGVNDV GGAVTIGLAH YSTAAEVDQL VRALASLG