Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_4602 |
Symbol | |
ID | 5832250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 5142505 |
End bp | 5143371 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641370396 |
Product | aminotransferase |
Protein accession | YP_001642041 |
Protein GI | 163853998 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.042075 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACTC CCGATCAAGA TACCTGGACC TTCTTCGAGG GCGCGTGGCA CCCCGGCAAT GTCCGGATCA TGGGGCCGCG CACCCACGGT GCGTGGCTCG GCTCGACGGT GTTCGATGGC GCCCGCGCCT TCGAGGGCGT CACGCCCGAC CTCGACCTGC ACCTCGCCCG GGTCAACCGC TCGGCCACCG CCCTCGGTCT CACGCCAAAG GTCGCGGTCG AGGAATGGGC CCGGCTCGTC GCCGAGGGGC TGACGCGCTT TGCGCCCGAC GCCGAACTCT ACATTCGGCC GATGTACTGG GCCGAGAGCG GGTTCGCCGG CGGCGTGCGC TTCGATCCCG CCTCCACCAA CTGGTGCCTG TCGCTCTACA CCGCGCCGAT GCCGCTGCCG TCGGGCGTCA AGGCGACGCT CTCGCCCTTC CGCCGCCCGT CGATCGAGGT CGCCCCCGTC GATGCCAAGG CCGGCTGCCT CTACCCCAAC GGGGCGCGGG CGCTCACCGA GGCTTTGTCG CGCGGCTTCG GCAATTGCCT GATGCTCGAC GGGCTCGGCA ACGTCGCCGA GTTCGCCAAC GCCAATGCGT TCTTCGCGCA AGACGGGGTG GTCTACACCC CGGTCCCGAA CGGGACGTTC CTCGCCGGTA TCACCCGCGG CCGCGTCCTC GCGCTGTTGC GCGGGGCCGG TGTCACGGTG GTGGAGAAGA CGCTGCGCTA CGAGGACTTC CTAAGCGCCG ACGAGGTCTT CACCGCCGGC AACTTCGCCA AGGTCGCCCC GGTCACCGGG CTCGATGACG TACGCTTCGA GCCCGGCCCG TTGTTTCGCC TTGCACGCCA GCTTTACTGG GATTTCGCGC ACGGGCGGCT GTCGTAG
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Protein sequence | MTTPDQDTWT FFEGAWHPGN VRIMGPRTHG AWLGSTVFDG ARAFEGVTPD LDLHLARVNR SATALGLTPK VAVEEWARLV AEGLTRFAPD AELYIRPMYW AESGFAGGVR FDPASTNWCL SLYTAPMPLP SGVKATLSPF RRPSIEVAPV DAKAGCLYPN GARALTEALS RGFGNCLMLD GLGNVAEFAN ANAFFAQDGV VYTPVPNGTF LAGITRGRVL ALLRGAGVTV VEKTLRYEDF LSADEVFTAG NFAKVAPVTG LDDVRFEPGP LFRLARQLYW DFAHGRLS
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